Gene Information

Name : PHZ_c2696 (PHZ_c2696)
Accession : YP_002131534.1
Strain : Phenylobacterium zucineum HLK1
Genome accession: NC_011144
Putative virulence/resistance : Virulence
Product : response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain)
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3091487 - 3092179 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence :
GTGCGCATCCTGCTTGTTGAAGACGATCCGGACCTGTCGCGGCAGCTGAAGCTGGCGCTGACCGACGCCGGCTATGCGGT
CGACCACGCCCCGGACGGCGAGGAGGCCCAGTTCCTGGGCGAGACCGAGCCCTACGACGCCATCATCCTCGACCTCGGCC
TGCCCAAGGTGGACGGCGTGTCGGTGCTGGAGCGCTGGCGGCGCGAGAACATGGCCACGCCGGTGCTGATCCTGACGGCG
CGCGGCGCCTGGAGCGAGAAGGTGGCTGGCTTCGACGCCGGGGCCGACGACTACCTGACCAAGCCGTTCCACACCGAGGA
GCTGCTGGCCCGCCTGCGCGCCCTGCTGCGCCGCTCGGCCGGCCACGCGACGCCCAACCTGTCGTGCGGCGGCCTGCGGC
TGGACCCGCGGGCGGCGCGCGCCAGCGTCAACGGCGAGCCGCTCCGCCTGACGTCGCTGGAATACCGCCTGCTGCACTAC
CTGATGATGCACCAGGGCCGGGTGATCAGCCGCACCGAGCTGGTGGAGCACCTGTACGACCAGGATTTCGACCGCGATTC
CAACACCATCGAGGTCTTCATCGGCCGGGTGCGGAAGAAGATCGGCGCCGACCGGATCGAGACCGTCCGCGGTCTGGGCT
ACCGGCTGATCTGTCCGGAGGACGAAATGGGGGCGGAGACTGCGGGGACCTAG

Protein sequence :
MRILLVEDDPDLSRQLKLALTDAGYAVDHAPDGEEAQFLGETEPYDAIILDLGLPKVDGVSVLERWRRENMATPVLILTA
RGAWSEKVAGFDAGADDYLTKPFHTEELLARLRALLRRSAGHATPNLSCGGLRLDPRAARASVNGEPLRLTSLEYRLLHY
LMMHQGRVISRTELVEHLYDQDFDRDSNTIEVFIGRVRKKIGADRIETVRGLGYRLICPEDEMGAETAGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-29 46
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-25 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) CP000647.1.gene1136. Protein 2e-37 48
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0530 Protein 2e-37 48
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) CP004022.1.gene1005. Protein 3e-40 47
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) CP001918.1.gene2526. Protein 1e-36 47
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) CP000034.1.gene2022. Protein 4e-37 46
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) NC_002695.1.913289.p Protein 2e-36 46
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) CP001138.1.gene1939. Protein 3e-37 46
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) NC_002516.2.879194.p Protein 5e-37 46
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0487 Protein 2e-29 44
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0197 Protein 4e-29 43
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0347 Protein 2e-24 41
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0111 Protein 7e-28 41
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0083 Protein 3e-26 41
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) AE015929.1.gene1106. Protein 8e-22 41
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0125 Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) VFG0475 Protein 3e-37 46
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) VFG0473 Protein 8e-32 44
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) VFG1390 Protein 2e-24 42
PHZ_c2696 YP_002131534.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) VFG0596 Protein 2e-25 42