Gene Information

Name : PHZ_c2688 (PHZ_c2688)
Accession : YP_002131526.1
Strain : Phenylobacterium zucineum HLK1
Genome accession: NC_011144
Putative virulence/resistance : Virulence
Product : response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain)
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3082138 - 3082809 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
ATGCGGATCCTGATCGTCGAAGACGACCTCGAGGCGGCGGGCGTGATGGTCCGCGGCCTCACCGAGGCCGGCCACGACTG
CGTCAGCGCCGCCGACGGCGAGGAGGGTCTGAAGGCCGCCCGCGACGGCGAGTTCGACGTGATGATCGTCGACCGGATGA
TGCCCAAGATGGACGGGGTCACTCTCGTGGAGACCCTGCGCCGCGAGGGCGACCGCACGCCGGTGCTGTTCCTCTCGGCC
CTGGGCGAGGTGGCGGACCGCGTCGACGGCCTGCAGGCCGGCGCCGACGACTACCTGGTCAAGCCCTACGCCTTTCCCGA
GCTGATCGCCCGGATCGAGGCCCTGGCCCGGCGCCGCGACACCGGCTCGGTCAACACCCTGCTGCGGGTGGGCGAACTCG
AGATGGACCTGATCGCCCGGACGGTGCACCGCGCCGGCAAGGAGATCGACCTGCAGCCGCGCGAGTTCCAGCTGCTCGAG
TTCATGATGCGCCACGCCGGCCAGTCGGTGACCCGCACCATGCTGCTGGAGAAGGTCTGGCACTACCACTTCGACCCGCA
GACCAACGTCATCGACGTGCACATCTCGCGGCTGCGCTCGAAGATCGACAAGGGGTTCGACCGGCCGATGCTGCAGACCG
TGCGCGGCGCGGGCTACCGGCTGGACGCCTAG

Protein sequence : 
MRILIVEDDLEAAGVMVRGLTEAGHDCVSAADGEEGLKAARDGEFDVMIVDRMMPKMDGVTLVETLRREGDRTPVLFLSA
LGEVADRVDGLQAGADDYLVKPYAFPELIARIEALARRRDTGSVNTLLRVGELEMDLIARTVHRAGKEIDLQPREFQLLE
FMMRHAGQSVTRTMLLEKVWHYHFDPQTNVIDVHISRLRSKIDKGFDRPMLQTVRGAGYRLDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-34 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PHZ_c2688 YP_002131526.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0125 Protein 4e-43 47
PHZ_c2688 YP_002131526.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0347 Protein 4e-41 46
PHZ_c2688 YP_002131526.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0197 Protein 1e-39 46
PHZ_c2688 YP_002131526.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0083 Protein 4e-42 44
PHZ_c2688 YP_002131526.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0111 Protein 6e-44 44
PHZ_c2688 YP_002131526.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0308 Protein 8e-40 44
PHZ_c2688 YP_002131526.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) BAC0638 Protein 2e-35 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PHZ_c2688 YP_002131526.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) VFG1389 Protein 8e-32 44
PHZ_c2688 YP_002131526.1 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) VFG0596 Protein 5e-35 43