Gene Information

Name : virB4 (PHZ_c2350)
Accession : YP_002131189.1
Strain : Phenylobacterium zucineum HLK1
Genome accession: NC_011144
Putative virulence/resistance : Virulence
Product : type IV secretory pathway, VirB4 component
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 2661119 - 2663500 bp
Length : 2382 bp
Strand : +
Note : -

DNA sequence :
TTGCGACCGCGGAGGTTACCCGTGGCTAGCCTCTCCGCCCGCCGGCGCGAACCAGAACCGGCTCGCTTCCTGCCCTATGC
CCTCCATGTCTCCGACAGCGTGCTGGCGCTGGATAGCGGGGCCTTGATGACCTGCTTCCGCCTCACTGGGGCGAGTTTCG
AAACGGCCGACATTCGGGACCTCAACGACCGACACGTCAGGCTCAACGCCAGCTGGCGAAATCTCGCCAGCGACCGGCTC
GCCGTCTGGCATCATCTCGTGCGGCGTCAGCAGACCGCGTGGCCGGACGGCGATTTCCAGTCGGCCTTCGCGCAAGAACT
GGACGCGGCTTATCGCGGCCGCATGGCCGCAGGGCGGCTCTACGCGAATGACCTCTTCGTCACCCTCGTTCTGCACCCCG
GTGTTGACCCTGCGGAGCGCACCCAGGCGTGGGTGCAGCGTCTGATCGGCCGCGGCGTCCCCGCCGTCGATGACGCCGAT
GTCTCGCGGCTCGAGGAGATCGCCGAGGACCTGGCGCAACACCTCAGGCGCTATGAACCGACCCGGCTTGGTCTGCGTCA
CCTCGACGGTCTCGTCTTTTCCGAGCCGCTCGAGATGCTGCGCCTGATCCTCACCGGTCGTCCTGAGGCCGTCCCCCTCA
CGCGAGGTCACCTGGGAGCTGCGCTCTACGCCTCACGACTGATCTTTGGCCGTGAGGCGATCGAGATCCGCGACGCCGCC
GAGACGCGCTATGCCGGCATGCTGGGGTTGAAGGAGTATCCGGCCGCAACGCGGCCCGGGCACTGGGACACCCTGCTCTC
CGCCCCCTTTCCCTTTGTGCTCTCCCAGTCTTTCGCCTTCCTCTCGAAGCCGGCCGCCCAGGCGGTGATGAGCCGCAAGC
AGAACCAGATGGTCTCGACGCGGGACCGGGCGGCCTCTCAGATCGCGGGACTCGACGAGGCCCTGGACGACCTGACCTCG
AACCGCTTCGCGCTTGGAGAACACCAGGCCTCACTTCTGGTCCTGGGCGACACCGCTCGCGCTTTGGCTGACCACATGTC
GCGCGCCAGCGCGCTCCTGGCCGAAAGCGGCCTTGTCGTCGTGCGCGAGGATCTCGGGCTGGAGGCCGGCTTCTGGGCGC
AGTTCCCGGGCAACTTCCGCTATCGGCTGCGGCCCGCGGCGATCACCAGCCGCAATTTCGCAGGCCTGGCGCCCTTCCAC
ACCCATCCCGCGGGACGCGGTCATGGCAATCACTGGGGCGAGGCCGTCGCCCTGCTGCGCACCACGGCTGGGTCGCCCTA
CCACTTCAATTTCCACGCCGGCGACCTCGGCCACACCTTCATCTGCGGCCCCTCAGGCTCGGGGAAGACGGTCGTCCAGA
ACTTCATGCTCGGCCAGCTGGAGAAGCTCGGCTGCCAGCAGGTGTTCATCGACAAGGATCGGGGGGCGGAAATCTTCATC
CGCGCCTGCGGTGGGACGTACCTCACACTGCGCCCCGGCGAGCCCACCGGCTTTGCGCCGCTGAAGGCGGCCGCGGATAC
GCCGCCAGACCGGGCGTTTCTCCGCGCATTGATCCGCAGCCTCGTCGCGGGCGCGGATGGCGCATTGGGCGTCGAGGACG
AGAACGCCATCGAGCGGGCGGTCGCCGCCGTCCTGAAGCTGCCCGCCGACGAGCGCTCGTTCGCGGCGCTCCGCAGTCTC
CTCGGTCAGCGGGAAGCCGGCGGGATTGGCGCGCGCCTGGATCGGTGGCGGCAGGGACGGGCGCTGGGTTGGGCGCTCGA
CGGCGAAACCGATGCGCTGGATCTGTCTCCACGTCTCGCCGGCTTCGACATGACCCATCTCCTCGACTCCGCGGAGGTGC
GAACTCCGTTGATGCTCTACCTCTTCCACCGGCTGCAGAAGCTGGTCGACGGCCGACGCCTCGTCATCGACATCGACGAG
TTCTGGAAGGCGCTCGGCGACGAGGCCTTCCGGGGGCTGGCTGAGGACGGCCTGAAGACCTTCCGCAAGCAGAACGCCTT
CATGGTGTTCGGCACCCAGTCCCCCGCTGACGTCCTGCGCTCGCCGATCGCCCACACGATCGTTGAGCAGTGCGCCACCA
AAATCTTCCTGCCCAATCCCCACGCCAGCGAGCGGGATTACGTCGACGGCTTCGGTCTCACATGCCGCGAGTTCCAGCTC
ATCCGCGACGAGCTCAGCGCCGAACAGCGCCGCTTCCTGGTGAAGCAGGGGCTCGACTCCGTCGTCGTCGAGCTCGACCT
GGGCGGCCTCGAGGACGCCCTGGCGGTGCTGTCAGGCCGCGCAGAGACGGTCGACCTGCTCGATCGCATTCGCGGGATCC
ACGGCGACGATCCCACTGCCTGGCTCGCCCCCTTCCAGCAAGCCCGACGCGAGGCGCGATGA

Protein sequence :
MRPRRLPVASLSARRREPEPARFLPYALHVSDSVLALDSGALMTCFRLTGASFETADIRDLNDRHVRLNASWRNLASDRL
AVWHHLVRRQQTAWPDGDFQSAFAQELDAAYRGRMAAGRLYANDLFVTLVLHPGVDPAERTQAWVQRLIGRGVPAVDDAD
VSRLEEIAEDLAQHLRRYEPTRLGLRHLDGLVFSEPLEMLRLILTGRPEAVPLTRGHLGAALYASRLIFGREAIEIRDAA
ETRYAGMLGLKEYPAATRPGHWDTLLSAPFPFVLSQSFAFLSKPAAQAVMSRKQNQMVSTRDRAASQIAGLDEALDDLTS
NRFALGEHQASLLVLGDTARALADHMSRASALLAESGLVVVREDLGLEAGFWAQFPGNFRYRLRPAAITSRNFAGLAPFH
THPAGRGHGNHWGEAVALLRTTAGSPYHFNFHAGDLGHTFICGPSGSGKTVVQNFMLGQLEKLGCQQVFIDKDRGAEIFI
RACGGTYLTLRPGEPTGFAPLKAAADTPPDRAFLRALIRSLVAGADGALGVEDENAIERAVAAVLKLPADERSFAALRSL
LGQREAGGIGARLDRWRQGRALGWALDGETDALDLSPRLAGFDMTHLLDSAEVRTPLMLYLFHRLQKLVDGRRLVIDIDE
FWKALGDEAFRGLAEDGLKTFRKQNAFMVFGTQSPADVLRSPIAHTIVEQCATKIFLPNPHASERDYVDGFGLTCREFQL
IRDELSAEQRRFLVKQGLDSVVVELDLGGLEDALAVLSGRAETVDLLDRIRGIHGDDPTAWLAPFQQARREAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB4 YP_001610000.1 VirB4 protein Virulence Not named Protein 0.0 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virB4 YP_002131189.1 type IV secretory pathway, VirB4 component VFG2233 Protein 0.0 51