Gene Information

Name : MADE_1004830 (MADE_1004830)
Accession : YP_004426110.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 1042873 - 1043547 bp
Length : 675 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGATTAGAATTGAGAATTTAACCAAGAGCTACCCCAGTAAAATGGGGCCTCAATATATTTTTAAAAATCTAAACTTTGA
TTTCCCTACGGAAAACAATGTCGCCATTTTAGGTAAGAACGGGGCGGGTAAATCCACCCTTTTCCGCATGCTTGCGAAAA
GCGAATACCCCGATAGAGGCCGAGTTTTAACCAACAAATCTATGTCGTGGCCGGTTGCGCTTCAAACTGGCGTACATCCG
CAGATGACAGGGCGTGAAAACACCCGCTTTGTTGGCCGAATTAATAATGTGGCTTCACTCCCCGAATATGAAGAAAAAGT
GCAGGAGTTTGCAGAGTTAGGCAAACGCTTTGATCTACCTGTGCGCACTTATTCCTCAGGTATGCGCGCAAAACTTGTTT
TCGCTTGCTGCATGAATATCAATTTCGATATTTACCTGATAGATGAAGCGACATCCGTTGGTGACCCGCTTTTCAGAAAA
AAGGCTCGCTTGTCACTTAAAGAAAAAAGTGAACAGGCTGGGGTTATTATGGTGAGCCACGAACTCGATCAGATACGAGA
GTTCTGCACTTCGGCCGTCATCATTGATGATGGCAATCTCACTTATTATCACGATCTCGAAGAAGGCATCGACGTTTACA
CGCAGGATGCAGACAATAAGAAATCACTCAAATAG

Protein sequence : 
MIRIENLTKSYPSKMGPQYIFKNLNFDFPTENNVAILGKNGAGKSTLFRMLAKSEYPDRGRVLTNKSMSWPVALQTGVHP
QMTGRENTRFVGRINNVASLPEYEEKVQEFAELGKRFDLPVRTYSSGMRAKLVFACCMNINFDIYLIDEATSVGDPLFRK
KARLSLKEKSEQAGVIMVSHELDQIREFCTSAVIIDDGNLTYYHDLEEGIDVYTQDADNKKSLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-45 46
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 5e-45 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MADE_1004830 YP_004426110.1 ABC transporter ATP-binding protein VFG1449 Protein 8e-46 46
MADE_1004830 YP_004426110.1 ABC transporter ATP-binding protein VFG2563 Protein 3e-37 41