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Name : MADE_1004725 (MADE_1004725) Accession : YP_004426089.1 Strain : Alteromonas macleodii Deep ecotype Genome accession: NC_011138 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1020004 - 1022595 bp Length : 2592 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGATGCGCCAATATTTAAGCATAAAGGCGCAACATCCGAATATTCTACTTTTTTATCGCATGGGCGATTTTTACGAGTT ATTTTATGACGATGCCAAAAAAGCTGCTGAATTACTGGACATTTCGCTTACGGCGCGAGGTAAATCGGGTGGCGAGCCCA TTCCCATGGCAGGCGTGCCTTATCATGCGGTAGAAAGCTACCTATCGCGTTTAGTAAAAATGGGGGAGTCGGTTGCCATT TGTGAACAAGTTGGCGACCCAGCGACGAGCAAAGGCCCCGTTGAGCGTGCCGTACAGCGCATTGTTACGCCGGGCACTGT AACCGACGAAGCTTTATTAGAAGAGCGTCGCGACAATATTCTTGCCGCTGTGTGCGGCCATAGCATGCATTATGGGTTAG CCACATTAGATGTAACTAGCGGTCGCTTTGTGGTGTTCGAGTGCGATAGTGATGAAAGCTTACTGGCTGAAATTCAGCGC ATTAACCCGGCTGAGTTACTTTACCCTGAAGGCTTTGAAAGCCTGTCTCTTGTTGAAAATCGCAAAGGGCTACGCAGGCG TCCCGAGTGGGAATTCGACGTAGATACTGCAAATGAACAGCTTAACGCCCAGTTTGAAACTAAAACATTAGATGGCTTTG GTATAAAAGGCGTCACTAAAGGATTAGGCGCAGCAGGTTGTGTTTTACAATATGTAAAAGATACCCAGCGCACTGCCCTG CCCCACATTCGCCGCATTCAGACTGAACAGCAAGACAGCCGTGTTCAGCTTGATGCCGCAACGCGCAGAAACCTGGAACT TACCCATAATTTGTCTGGCGGTCAGGAAAATACCCTGTTCAGCGTAATGGACACTACCACCACGGCCATGGGCAGTCGTA TGTTACAGCGAATCATTCACTCGCCGCTGACCGACCAGCATGAGCTCCAAAGCCGCTTAGACGCAATAGACACCTTTATT AATGACGATCCTGAAGATATCCGCAATGCGCTAAAACACATTGGCGACATAGAGCGTATTATGGCGCGTTTAGCCCTTCG CTCGGCGCGCCCTCGGGATTTTGCACGTTTAAAAAATGCGTTTAATGCACTGCCTGATTTGCAAGATGCTCTTGCCCGTT TTGACACAGGACAAATTAGAAGTATTGGCGAAACCATTGGCACTTACCCTGAGCTTCAAGCCCTGTTAAACAGCGCTATA ATCGATAACCCACCAGTTGTTATACGCGATGGTGGCGTAATTGCCGAAGGCTATAATGCTGAACTGGATGAATTGCGTAA GCTATCACAAGGCGCTACCGACTACTTAGATGCGATGGAGCAACGTGAGCGTGAACGCACAGGCATTTCCACATTGAAAG TGGGCTATAACAAAGTGCACGGGTTTTTTATTGAAATTAGTCGTGCTAACAGCGCTTTGGCCCCCGCCGAATACATCCGA AGACAGACCCTTAAGAACACCGAACGTTACATTACGCCTGAGCTTAAAGAACACGAGGACAAAGTGCTAAGTAGCCAAGG GGCTGCACTTGCCCTTGAAAAACAGCTTTATGAAGCCTTGTTCGACAATTTTGCGCCATACCTCAACAAGTTAATTGAAA CCGCCGCAGCGCTTGCCAAGCTCGACGTGCTGTGCTGTTTTGCCGAACGCGCGGTATCGCTCGATTGGCATCGGCCAAAA TTGAGCCAAGAATGTGCGCTTACTTATGATGCCGGTCGCCACCCTGTGGTTGAGAACGTAATGAAAGACCCCTTCATTGC CAACCCACTGCAACTGGATACTGAGCGCCGTATGCTCGTTATTACCGGCCCAAACATGGGCGGTAAATCGACCTACATGC GTCAAACAGCGCTTATTGCTTTATTGGCCTGCATCGGCAGTTATGTGCCTGCTGAAAACGCCCACATCGGCAAGCTGGAT CGCATATTCACCCGGATTGGCGCATCAGATGACCTGGCCTCTGGCCGCTCAACCTTCATGGTTGAAATGACCGAAACGGC AAATATTCTTAATAACGCGACTGAAAACTCACTGGTGTTAATGGATGAAATTGGCCGTGGTACCAGCACCTATGATGGTT TATCGCTGGCATGGGCTTGCGCGAGCTACTTGGCGAAGCAACTCAACGCCTACACCCTTTTTGCGACCCACTATTTTGAG CTGACCGAACTACCCGAAACGCAAGCAGGCGTTGTGAACGTGCATCTTAATGCGATGGAGTTTGAAGACACCATTCGCTT TATGCATACCGTATCTGAAGGCGCCGCGAACAAGAGCTTTGGTTTACAGGTTGCGCAACTTGCTGGTGTACCAAAACCTG TGATTAAAGCCGCTCAGCAAAAGCTCGCTATTTTAGAATCATCACACGTCATGACCAGTGATGAATCAAGGGGCAGTGAC ACTTCACAAGCGCAAAGCAACACCTCCAGAAAAATTGACAACGGTTCAAATGCGAAAGGACAAGCAGAAATGCTTTTTCC AGACAAACCGCACCCCGTGGTGGAAGCACTTGAAAACTTATCGCCCGATGAGCTATCTCCTCGCCAAGCGCTCGACCTCA TCTACACCCTTAAACGCTTAAGTCAATCGTAA Protein sequence : MMRQYLSIKAQHPNILLFYRMGDFYELFYDDAKKAAELLDISLTARGKSGGEPIPMAGVPYHAVESYLSRLVKMGESVAI CEQVGDPATSKGPVERAVQRIVTPGTVTDEALLEERRDNILAAVCGHSMHYGLATLDVTSGRFVVFECDSDESLLAEIQR INPAELLYPEGFESLSLVENRKGLRRRPEWEFDVDTANEQLNAQFETKTLDGFGIKGVTKGLGAAGCVLQYVKDTQRTAL PHIRRIQTEQQDSRVQLDAATRRNLELTHNLSGGQENTLFSVMDTTTTAMGSRMLQRIIHSPLTDQHELQSRLDAIDTFI NDDPEDIRNALKHIGDIERIMARLALRSARPRDFARLKNAFNALPDLQDALARFDTGQIRSIGETIGTYPELQALLNSAI IDNPPVVIRDGGVIAEGYNAELDELRKLSQGATDYLDAMEQRERERTGISTLKVGYNKVHGFFIEISRANSALAPAEYIR RQTLKNTERYITPELKEHEDKVLSSQGAALALEKQLYEALFDNFAPYLNKLIETAAALAKLDVLCCFAERAVSLDWHRPK LSQECALTYDAGRHPVVENVMKDPFIANPLQLDTERRMLVITGPNMGGKSTYMRQTALIALLACIGSYVPAENAHIGKLD RIFTRIGASDDLASGRSTFMVEMTETANILNNATENSLVLMDEIGRGTSTYDGLSLAWACASYLAKQLNAYTLFATHYFE LTELPETQAGVVNVHLNAMEFEDTIRFMHTVSEGAANKSFGLQVAQLAGVPKPVIKAAQQKLAILESSHVMTSDESRGSD TSQAQSNTSRKIDNGSNAKGQAEMLFPDKPHPVVEALENLSPDELSPRQALDLIYTLKRLSQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MADE_1004725 | YP_004426089.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 63 |
