|
Name : rpmG (MADE_1000270) Accession : YP_004425201.1 Strain : Alteromonas macleodii Deep ecotype Genome accession: NC_011138 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L33 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0267 EC number : - Position : 60902 - 61057 bp Length : 156 bp Strand : + Note : in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of th DNA sequence : ATGCGTGATAAAATTAAACTAGTTTCTTCAGCAGGTACAGGTTTCTTCTACACCACTGATAAAAACAAGCGTAACATGCC TGGCAAAATGGAGATCAAAAAGTATGATCCCGTTGTGCGTAAGCACGTTATGTTCAAAGAGGCCAAAATCAAGTAA Protein sequence : MRDKIKLVSSAGTGFFYTTDKNKRNMPGKMEIKKYDPVVRKHVMFKEAKIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpmG | NP_814353.1 | 50S ribosomal protein L33 | Not tested | Not named | Protein | 8e-06 | 45 |
| ef0106 | AAM75309.1 | EF0106 | Not tested | Not named | Protein | 6e-06 | 45 |
