Gene Information

Name : MADE_1002620 (MADE_1002620)
Accession : YP_004425671.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 553335 - 554810 bp
Length : 1476 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGTAAGTGTCCATTTTCAGGTACAGCCATAAACCCTACCACGCTAACGTCTAGCAATGGTGCGCCCGTTGCTAATGA
CAACCAAAGTCGCACCGCCGGACCTCGTGGCCCTGTTACTTTCGACAACCACTATTTATTCGAGAAGCTTGCGCACTTTA
ACCGCGAGCGCATTCCTGAACGCGTAGTTCACGCTAGAGGTAGTGCAGCGTATGGTACTTTTACGCTTACTAAGAGTTTA
TCCGATTACACCATTGCCGACTTTCTTCAGCAAGAAGGACAGCAAACTAACGTCTTTCTACGTTTCTCTACAGTAGGTGG
TGGTCAAGATTCAAGCGACTACGCTCGCGACCCCCGTGGTTTTTCTGTGAAGTTTTACACCGAACAGGGCAACTGGGATA
TGGTGGGCAATAATACGCCAGTGTTTTTCTTGCGAGATGGCATTAAGTTCCCTGATTTTATACACAGCCAGAAAAAGAAC
CCGCGAACTAACTTACCAGATCCGCAGGCGGTATATGAGTTTTGGGCGAACAATCCGCAGTCATTACACCAATCAACAAT
TTTGATGTCAGATCGTGGTATTCCGCTGTCTTATCGCCACGTGAACGGCTACAGCTCTCATACATTGAGTTTATGGAATA
AAGCCGGTGAGCGCTATTGGGTGAAGTGGCACTTTAAAACTAACCAAGGTATCAAAACGCTCACGAACGAAGAAGCAGCG
AGAATGCCTGCTTACGGTGCGCAGCAAGACCTTGTTGAAAGTATCGATAACGGTGACTTTCCATCTTGGACTGTAAACGT
TCAAATTATGACGGAAGAAGAAGCGCGTAATTACCGTATTAACCCGTTTGACTTAACAAAGGTATGGCCACACAGCGACT
TCCCGTTGATTGACGTGGGGCAACTGGAGTTAAATCGCAATGTGGAAAATTATTTTGCAGAAACAGAGCAAGCAGCGTTT
GCGCCGAGCAATTTGGTACCGGGTATTGGCGTGTCGCCAGACAGGATGCTACAAGCGCGACTAATTGGATATCAAGATGC
GCACAGGTACCGTATTGGCGCTAATTACAACCAAATACCGGTAAATGCGCCACGCTGTCCAGTGCACAATTATCAGCGTG
ACGGTGCGTTTGCAGGCGTTAATCCAGCACTTGCGGGAAGTGGAGCAAACTTCTATCCAAATAACCGTGCGCGAGTTGGT
GAGCCAGCCGAAGCGCCAGAAGTACAAGAGCCACCAATGCCGCTAGAGCAAGATGCATGGTTAGATATTTATGATAATCG
TGATGAAGATAACTACTCTCAGGCAGGCGATTTGTACCGCATTATGAGTGAAGATCAGAAACAGCAGTTGGTACAGAATA
TCGCTGATGGTCTAAGCCAAGCTACACAGGACGTGCAAGAGGCTATGTTCGTGCAATACGACTTAGCCGATAAAGACTAC
GGCGCCCGTGTAAGAAAGGCGGTAGCCAGCAGATAG

Protein sequence :
MSKCPFSGTAINPTTLTSSNGAPVANDNQSRTAGPRGPVTFDNHYLFEKLAHFNRERIPERVVHARGSAAYGTFTLTKSL
SDYTIADFLQQEGQQTNVFLRFSTVGGGQDSSDYARDPRGFSVKFYTEQGNWDMVGNNTPVFFLRDGIKFPDFIHSQKKN
PRTNLPDPQAVYEFWANNPQSLHQSTILMSDRGIPLSYRHVNGYSSHTLSLWNKAGERYWVKWHFKTNQGIKTLTNEEAA
RMPAYGAQQDLVESIDNGDFPSWTVNVQIMTEEEARNYRINPFDLTKVWPHSDFPLIDVGQLELNRNVENYFAETEQAAF
APSNLVPGIGVSPDRMLQARLIGYQDAHRYRIGANYNQIPVNAPRCPVHNYQRDGAFAGVNPALAGSGANFYPNNRARVG
EPAEAPEVQEPPMPLEQDAWLDIYDNRDEDNYSQAGDLYRIMSEDQKQQLVQNIADGLSQATQDVQEAMFVQYDLADKDY
GARVRKAVASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 2e-109 52
katA YP_005126717.1 catalase Not tested Not named Protein 1e-89 45
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 1e-87 44
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 1e-87 44
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 1e-87 44
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 1e-87 44