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Name : MADE_1019835 (MADE_1019835) Accession : YP_004429087.1 Strain : Alteromonas macleodii Deep ecotype Genome accession: NC_011138 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 4333730 - 4334956 bp Length : 1227 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGCGGCTTTCGCTTATAAAGCGGTTAATGCCCGCGGTAAGAACACAAATGGCGTGCTTGAAGGCGATAATGCCCGTCA GGTGCGCCAACAGCTGCGCGAAAAGGGCTTAATTCCTTTGGAAGTAGAGCAAGTTGCAGAGCGCACACAAAACGAAGGCA AAGGGCTTTCATTTTCACTGTTTAAACCACGCATTTCAGCCTCCGATTTAGCGCTACTTACACGGCAAATGGCTACCCTT GTAGAGTCGGCCCTTCCGGTTGAAGAAGCCTTGCTTGCCGTTGCGGAACAATGCGAAAAGCCCCGCCAGAAAAACATGAT GATGGCAGTACGCAGTAAAGTCGTGGAAGGTCACGGGCTTGCCGATGCATTAGGACAGTTTCCCAGTGTGTTTGACGAGT TATACCGCGCCATGGTGGCGGCAGGTGAAAAGTCAGGCCACCTTGATACCGTGCTTAACCGCTTAGCCGACTATACCGAG CGCAGGCAGCAAACCCGCAGCCAAATTACTCAGGCGATGATTTATCCATCGTTAATGCTGTTTTTTGCAATGGGTATCGT ACTGCTGCTTTTAACCGTGGTAGTACCAAAAATTGTGGGGCAATTCGACCACATGGGGCAAGACCTTCCGGGTATTACCC AATTCCTTATTTCAGTGAGCACTTGGCTTCAAAACTACGGGTTGTTCATGCTAATCGGCATAGGCGTGCTTATAGTTATT ATACAGCGCGTATTGCAGCAAAAGCATATGAAGCTGCGCTATCACAAAGCGCTTTTAACCTTACCTTTGATAGGCCGCGT GTCGCGCGGTCTAAACACGGCCCGCTTTGCACGTACGTTAAGTATATTAAGTGCCAGCGCAGTGCCGCTACTTGAAGCTA TGCGTATTTCAGGCGATGTCCTTGAAAATCAGCATATTAAAAATCAAGTAGCCGACGCCGCTATTAACGTTAAAGAAGGT AGCAGTTTGAGGGCTGCGCTGGATAACACGAAAATGTTTCCACCTATGATGATGCATATGATTGCGTCAGGTGAAAAGTC GGGCGAATTACAGCAAATGCTAGCTCGCGCCGCAGATAATCAAGATAGGGAATTTGAAGCGCTTATTGGTGTCTCACTTA AGGTATTTGAACCCTTACTTATTGTATCGATGGCGGGCATTGTTCTGTTTATCGTTATGGCAATATTGCAACCAATTTTA GCATTGAACAACATGGTGAATATTTAA Protein sequence : MAAFAYKAVNARGKNTNGVLEGDNARQVRQQLREKGLIPLEVEQVAERTQNEGKGLSFSLFKPRISASDLALLTRQMATL VESALPVEEALLAVAEQCEKPRQKNMMMAVRSKVVEGHGLADALGQFPSVFDELYRAMVAAGEKSGHLDTVLNRLADYTE RRQQTRSQITQAMIYPSLMLFFAMGIVLLLLTVVVPKIVGQFDHMGQDLPGITQFLISVSTWLQNYGLFMLIGIGVLIVI IQRVLQQKHMKLRYHKALLTLPLIGRVSRGLNTARFARTLSILSASAVPLLEAMRISGDVLENQHIKNQVADAAINVKEG SSLRAALDNTKMFPPMMMHMIASGEKSGELQQMLARAADNQDREFEALIGVSLKVFEPLLIVSMAGIVLFIVMAILQPIL ALNNMVNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 5e-88 | 54 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-87 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MADE_1019835 | YP_004429087.1 | general secretion pathway protein F | VFG2049 | Protein | 1e-82 | 53 |
| MADE_1019835 | YP_004429087.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-84 | 50 |
| MADE_1019835 | YP_004429087.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-74 | 44 |
