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Name : MADE_1019830 (MADE_1019830) Accession : YP_004429086.1 Strain : Alteromonas macleodii Deep ecotype Genome accession: NC_011138 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4332170 - 4333729 bp Length : 1560 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGCGGATGAACAACTTACTCAAGCACTAGAGGCCCAAGAAGAAGCCCTAGAAGCCATGGGTGATGACGCCGGCTTACC TGAAGCAGAGGCCGGCCCTAAGCAGCTCTCTTTTAGCTTTGCTAAGCGCAACCAGGTGCTGCTTGAAACCAACGAAACGC CAGCGGTGCTGTATTTTACAGAAAACACGCCGTTTGACGTGTTTGCAGAAGTGCGTCGCTTCTACGGCGAGCCTTTTGTA CCGAAAACTATACCCGCTGACGAATTTGAAAACTTACTGACTAGCGCGTTTCAGCGCGATAGTTCTGCAGCGAAGCAGTT AATGGAAGACTTAGGCAACGAAAGCGATTTATTCGCCCTTGCAGAAGACTTACCCGACACTGAAGACCTGCTAGATAGCG AAGACGACGCCCCTATTATCAAGCTTATTAACGCCATGCTAGGTGAAGCAATTAAAGAAGGCGCGTCAGATATTCATATC GAAACGTTTGAAAACCAGCTTGTGGTTCGCTTTCGGGTAGACGGTGTGTTGCGGGAAATTTTGCGCCCCAATCGCAAGCT TAGCTCTATGCTGGTATCGCGTATAAAAGTAATGGCCAAGCTAGATATTGCAGAAAAACGCGTCCCCCAGGATGGCCGTA TTACACTGCGTATTGCCGGGCGAGCGGTAGACGTTCGTGTTTCGACGATGCCTTCTAGCCACGGCGAACGTGTGGTACTG CGTCTTTTAGACAAAAATAACGCCCGCTTGAATCTAGAAGATTTGGGCATGACGCTGCAAAACCGTAACCATTTCTCGAC GTTAATACGAAAACCACACGGTATTATTTTGGTTACTGGCCCTACCGGTTCCGGTAAAAGTACCACCTTGTACGCAGGGC TTACCGAGATAAACTCCCGCGATAGGAATATTTTAACGGTAGAAGATCCTATCGAATTCGACCTGCCAGGCATTGGACAA ACGCAGGTTAACCCCCGTGTAGACATGACCTTTGCACGAGGCCTTCGCGCAATTTTGCGTCAAGACCCCGATGTTGTCAT GGTCGGTGAGATTCGTGATATCGAGACTGCGCAAATTGCCGTTCAGGCCAGTTTAACCGGTCACTTAGTGCTTTCTACCC TGCATACTAACACCGCCGCTGGCGCCATTACTCGCTTAGAAGACATGGGCATAGAGCCTTTCCTTTTATCTTCCAGTTTA TTGGCAGTACTGTCACAGCGACTCGTTCGTACGCTATGCCCAGACTGTAAAAAGCCGCATACGCCGGATGCGTCTGAACT TGAAATATTAGGCCAAGGGGCCACCAGCAGCACTACAATTTACAAACCTCACGGCTGTGCAGCGTGTAACCAAACCGGGT ATCGTGGCCGTACGGGTATTCACGAATTGCTTTTAGTTGATGAAAAAGTGCGTGAAATGATGCACGAAGGTGTGGGCGAA CAAGCCATTGAGCGCTACATCAGAACCTCTACCCCAAGCATCCGTGAAGATGGCTGTAGTAAAGTGCTTATCGGTGAAAC CTCTCTTGAAGAAGTGCTTCGAGTAACGAGGGAAGACTAG Protein sequence : MADEQLTQALEAQEEALEAMGDDAGLPEAEAGPKQLSFSFAKRNQVLLETNETPAVLYFTENTPFDVFAEVRRFYGEPFV PKTIPADEFENLLTSAFQRDSSAAKQLMEDLGNESDLFALAEDLPDTEDLLDSEDDAPIIKLINAMLGEAIKEGASDIHI ETFENQLVVRFRVDGVLREILRPNRKLSSMLVSRIKVMAKLDIAEKRVPQDGRITLRIAGRAVDVRVSTMPSSHGERVVL RLLDKNNARLNLEDLGMTLQNRNHFSTLIRKPHGIILVTGPTGSGKSTTLYAGLTEINSRDRNILTVEDPIEFDLPGIGQ TQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDIETAQIAVQASLTGHLVLSTLHTNTAAGAITRLEDMGIEPFLLSSSL LAVLSQRLVRTLCPDCKKPHTPDASELEILGQGATSSTTIYKPHGCAACNQTGYRGRTGIHELLLVDEKVREMMHEGVGE QAIERYIRTSTPSIREDGCSKVLIGETSLEEVLRVTRED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-151 | 65 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-151 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MADE_1019830 | YP_004429086.1 | general secretion pathway protein E | VFG0182 | Protein | 7e-144 | 65 |
| MADE_1019830 | YP_004429086.1 | general secretion pathway protein E | VFG2048 | Protein | 4e-150 | 64 |
| MADE_1019830 | YP_004429086.1 | general secretion pathway protein E | VFG1876 | Protein | 1e-130 | 57 |
| MADE_1019830 | YP_004429086.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-72 | 48 |
| MADE_1019830 | YP_004429086.1 | general secretion pathway protein E | VFG1880 | Protein | 1e-79 | 45 |
