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Name : MADE_1019825 (MADE_1019825) Accession : YP_004429085.1 Strain : Alteromonas macleodii Deep ecotype Genome accession: NC_011138 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 4330123 - 4332168 bp Length : 2046 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAAAAGGCGCACTAGCCAAAAACTATTATCTCGCTTAGGCACAGCAATGTGTACAGCGCTTCTGTGTTTCTCGGTGAC CGCTGCTGAGTACATGCCTAATTTCAAAGATACTGACATCAATGAATTCATCAATATCGTTGGTAAAAATCTTGAGCGCA CTATTATTGTGGACCCCAACGTACGCGGCAAAATTAGCGTACGCAGCTACGATATGCTCAATGAAGATCAGTACTATCAA TTTTTCCTAAACGTACTTCAGGTTTACGACTTTGCCGTTGTAGAAATGCCCAGCGGTATTTTAAAAGTGGTACGTTCTAA GGATGCAAAAACATCAAACATTCCGGTTGTCGAAGGCGCCAAGCAAGACGGTGATGAGTTCATTACTCGCGTGGTTCCAG TTTATAACGTGCCGGTACGTGAACTTGCCCCTATTTTGCGTCAATTAAACGACCAGGCGGGCGGCGGAAATGTGGTAAGT CACGACCCTTCTAACGTTATGATGCTAACTGGCCGCGCTGCGGTGGTTAATCGTCTTGTTGAAATCATTGAGCGCGTAGA CCGCGCTGGTGACGAAGAAGTAGAGATTGTTAAGCTTCGTTATGCTTCAGCTTCTGAGATGGTACGTATTATTGAAAGTA TCAACAAATCACAAGGTAAAGCCAATACAGGCGCTAAATCTGAACCTCGCGTTGTAGCAGACGACAGAACGAACTCTGTG ATCGTAAGCGGCGACATTAAAGCGCGTCAGCGTCTTATCAATCTTATTCAACGCATGGACCAAGAGCTGGAGTCCAATGG CAACACTCGCGTACTGTTTCTTAATTACGCTAAGGCAGAAGATTTAGTCAAAGTTCTGCAAGGCGTATCGGCCAGTATCC AAGCAGAAGAGCAAGGCAGCGGCGCCACATCGCGCAGAGCAAGCTCAAACCGCGAAATTAGCATCGACGCACACGAAGAT TCTAACGCCATCGTTATAACTGCAGAGCCAGACATGATGCGCTCGCTAGAAGAAGTGGTGCGTCAACTGGATATTCGCCG TGCACAGGTACAAGTTGAAGCCATTATCGTTGAAGTTTTTGAAGGCGACGGCAACACATTAGGTGTGCAATGGGTGTCAG AAGAGGGCGGTGGTACACAGTTCAATAATGGTGTTATAGGCGTCGGTTCATTAGCTGTGGCACTACGACAGGCCGAAGAT AGAGAGACCACGCAAACCAACATCACTGCCAACGGTGAAGTGGTAGAAACAACGGACACGATAGAAGGCGACTTCACTGC TCTTGCAAGCTTACTTGGCGGTGCAAACGGCCTGATTGCTGGCGTTATCGAAAATGGCTGGGGCGCAGTGGTACAAGCGG TAAGCACTGATACCAATTCAAATATTCTTGCCACACCTCACCTAACTACCATGGATAACGAAGAAGCGTTTTTCATTGTT GGTCAAGAGGTACCTATTATTACCGGTACGACAACCGGCTCGAACAACTCTAACCCGTTCCAAACGGTGGATCGTCAAGA AGTGGGTATTAAACTTAAAGTTACGCCGCAAATTAACGAAGGCGATGCCGTTCAGCTTCTTATTGAACAAGAAGTGTCTA GCGTTAGCGGTGCGACATCAGTAGACATCTCTATCAACAAGCGCGAAATCAAAACCACAGTGATTGTTGACGATGGTGGT ACTATCGTACTAGGCGGCTTGATTGACGAAGACGTACAAGAAAGTGTGTCTAAAGTGCCACTTTTAGGCGATATCCCTGT TCTTGGTCATCTTTTCAAGACGACGTCTACAAGCAAACGTAAGCGCAACTTAATGGTGTTCTTAAAGCCAACTATTGTAC GTGACGGTGCAACCATGAACGCCATTAGCCATCGTAAATATAACTACATTCGCGCACTCCAGCTTAAACGTCAGCAAGAG GGTGTATCGTTAATGCCGTCAGCTGAAACGCCAAGCATGCCGCAGTGGGACGATGCATTAGCCCTTCCACCGTCGTTTGA AGAGTACCTGACTGAGAAAGAGAAGCAAAAAGAAGGTAACGAGTAG Protein sequence : MKRRTSQKLLSRLGTAMCTALLCFSVTAAEYMPNFKDTDINEFINIVGKNLERTIIVDPNVRGKISVRSYDMLNEDQYYQ FFLNVLQVYDFAVVEMPSGILKVVRSKDAKTSNIPVVEGAKQDGDEFITRVVPVYNVPVRELAPILRQLNDQAGGGNVVS HDPSNVMMLTGRAAVVNRLVEIIERVDRAGDEEVEIVKLRYASASEMVRIIESINKSQGKANTGAKSEPRVVADDRTNSV IVSGDIKARQRLINLIQRMDQELESNGNTRVLFLNYAKAEDLVKVLQGVSASIQAEEQGSGATSRRASSNREISIDAHED SNAIVITAEPDMMRSLEEVVRQLDIRRAQVQVEAIIVEVFEGDGNTLGVQWVSEEGGGTQFNNGVIGVGSLAVALRQAED RETTQTNITANGEVVETTDTIEGDFTALASLLGGANGLIAGVIENGWGAVVQAVSTDTNSNILATPHLTTMDNEEAFFIV GQEVPIITGTTTGSNNSNPFQTVDRQEVGIKLKVTPQINEGDAVQLLIEQEVSSVSGATSVDISINKREIKTTVIVDDGG TIVLGGLIDEDVQESVSKVPLLGDIPVLGHLFKTTSTSKRKRNLMVFLKPTIVRDGATMNAISHRKYNYIRALQLKRQQE GVSLMPSAETPSMPQWDDALALPPSFEEYLTEKEKQKEGNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-146 | 53 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 3e-154 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MADE_1019825 | YP_004429085.1 | general secretion pathway protein D | VFG2047 | Protein | 3e-144 | 53 |
