Gene Information

Name : MADE_1001755 (MADE_1001755)
Accession : YP_004425498.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 382895 - 383230 bp
Length : 336 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGTTACCCTTATCTAATGGGCGTATTTGGTTGTACACCGGCAATGCCGATATGCGCAAACAGTTTGATGGGTTGGCAGC
GCTGGTACAGCGCAAGTTGGGCATGCAGGCGCATTGTGGTGACTGGTTTGTGTTTATCAATAAGCGCCGTACTCAGCTGA
AGGTGTTGTATTACTACCAGGGCGGTTATTGTTTGTGGAGCAAACGGTTAGAAAAAGGCACCTTCGCTAACGTGTCTGAC
GGCAACACCAAAACACCACTCAACAGTGCCCAGTTACAGTGTTTGATTGATGGGATTTACTGGCAAAAAGACAAACAAAA
CAGGCGATTTAATTAA

Protein sequence :
MLPLSNGRIWLYTGNADMRKQFDGLAALVQRKLGMQAHCGDWFVFINKRRTQLKVLYYYQGGYCLWSKRLEKGTFANVSD
GNTKTPLNSAQLQCLIDGIYWQKDKQNRRFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 2e-13 43
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 2e-14 43
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-15 43
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 8e-15 43
unnamed AAC31493.1 L0014 Not tested LEE Protein 1e-14 43
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 7e-14 43
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 1e-14 43
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 7e-14 43
unnamed AAL99258.1 unknown Not tested LEE Protein 1e-14 43
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-14 43
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 1e-14 43
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 2e-14 43
unnamed AAL08461.1 unknown Not tested SRL Protein 7e-15 43
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 2e-14 43
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 4e-16 42
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 4e-16 42
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 1e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MADE_1001755 YP_004425498.1 transposase IS66 VFG0792 Protein 5e-15 43
MADE_1001755 YP_004425498.1 transposase IS66 VFG1052 Protein 3e-15 43
MADE_1001755 YP_004425498.1 transposase IS66 VFG1709 Protein 5e-15 43
MADE_1001755 YP_004425498.1 transposase IS66 VFG1698 Protein 2e-15 43
MADE_1001755 YP_004425498.1 transposase IS66 VFG1665 Protein 5e-16 41