Gene Information

Name : MADE_1013795 (MADE_1013795)
Accession : YP_004427891.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 3886966 - 3888153 bp
Length : 1188 bp
Strand : -
Note : catalyzes the formation of UDP-glucuronate from UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGAAAGTACGCTAGCAAAGTACAAAATAGCAGTAGCAGGTACTGGGTACGTAGGCTTATCAAATGCCGTGTTACTTGC
ACAACACAATGAAGTGAAAGCAGTCGACTTGGTACCTGAAAAGGTCGAGATGCTGAATAACAAAAAGTCTCCAATTGAAG
ACAAAGAGATTTCTGAGTACCTAACGACTAAAGAGCTTAATCTTGAAGCTACGTTAGATGCACAGGTAGCATATAAAGAT
GCCGATTATGTGGTTATTGCAACGCCAACGGATTACGACCCGCAAACGAACTACTTCAACACAGGTAGTGTAGAAGCGGT
TATCAAAACGGTAATGGAAATTAACCCTGATGCAGTGATGATTGTTAAATCGACCGTGCCAGTAGGGTTCACTAAAGACG
CAAAAGCACGTTTCGGTACTGAAAATCTAATCTTCTCTCCAGAGTTCTTACGTGAAGGTAAAGCACTTTACGATAACCTT
CACCCTAGCCGCATTATTGTGGGTGAACGTAGCGAACGCGCTGAAGTATTCGCTAAATTGCTTGAGCAAGGCGCGATTAA
AGAAGAAATCGAAGTGTTGTTTACTGACAGCACTGAAGCTGAAGCCATTAAGCTTTTTGCTAATACTTACTTAGCCATGC
GTGTGGCTTATTTCAACGAGTTGGATAGCTATGCAGAACGAAATGGCTTAGACACCAAACAAATTATTGAAGGTGTAGGC
TTAGACCCTCGCATTGGTAAGCACTACAATAACCCAAGCTTTGGTTATGGTGGTTACTGCCTACCAAAAGATACTAAGCA
GTTACTTGCGAACTACAGTGAAGTGCCTAACAACATGATTCAGGCCATTGTAGATGCTAACCGTACCCGTAAAGACTTTA
TTGCTGATTCAATTGTAAGCCGCGGTCCTAAGATTGTTGGCATCTACCGCCTTATCATGAAGACTGGTTCAGACAATTTC
CGCGCCAGTGCGATTCAAGGCATCATGAAGCGCATTAAAGCGAAAGGTATTGAAGTGGTAGTATACGAGCCTGTACTCAA
AGAAGATGATTTCTTTAACTCACGCGTAGTAAACGACCTAGAAGAGTTTAAGAAAATCTCTGATGTTATCGTAGCCAACC
GTGTAACGGGCGATATTGAAGACGTACTCGACAAAGTTTACAGCCGCGACTTGTTCAACGCCGACTAA

Protein sequence :
MESTLAKYKIAVAGTGYVGLSNAVLLAQHNEVKAVDLVPEKVEMLNNKKSPIEDKEISEYLTTKELNLEATLDAQVAYKD
ADYVVIATPTDYDPQTNYFNTGSVEAVIKTVMEINPDAVMIVKSTVPVGFTKDAKARFGTENLIFSPEFLREGKALYDNL
HPSRIIVGERSERAEVFAKLLEQGAIKEEIEVLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAERNGLDTKQIIEGVG
LDPRIGKHYNNPSFGYGGYCLPKDTKQLLANYSEVPNNMIQAIVDANRTRKDFIADSIVSRGPKIVGIYRLIMKTGSDNF
RASAIQGIMKRIKAKGIEVVVYEPVLKEDDFFNSRVVNDLEEFKKISDVIVANRVTGDIEDVLDKVYSRDLFNAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 6e-94 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MADE_1013795 YP_004427891.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 7e-103 55