Gene Information

Name : glnA (MADE_1015985)
Accession : YP_004428325.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 3536208 - 3537617 bp
Length : 1410 bp
Strand : +
Note : forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltra

DNA sequence :
ATGTCAGTAGATAAGGCATTAGAGCTGATTAAAGAAAGTGAAGCGAAGTTTGTAGATTTACGTTTTACCGATACTAAAGG
TAAAGAACAACACGTATCTATCCCTGCGAGCGTTGTTGATGAAGAGTTTTTCGAAGAAGGTAAAATGTTCGACGGTTCTT
CAATCGCTGGCTGGAAAGGCATCAACGAATCAGACATGGTTCTTCTTCCAGACGCAGACAGCTGCGTTGTAGACCCTTTC
GCAGAAGAGACTCAGGTAAACATTCGCTGTGACATCGTTGAGCCTTCAACAATGGAAGGTTACGAGCGTGACCCACGTTC
TGTTGCACGTCGCGCAGAAGAGTACTTGAAATCAACAGGTATCGGCGACACATGTTTCTTCGGCCCAGAGCCAGAATTTT
TCCTTTTCGACGATGTTCGCTTCCACACTGACATGGCAGGCTCGTTCTACAAGATCGATTCATCAGAAGCCAAGTGGAAC
TCAGGTGAAGAGTTTGAAGGCGGTAACATGGCGCACCGTCCAGGCGTTAAAGGCGGTTACTTCCCAGTACCACCAGTAGA
CTCTGCACACGACATTCGTGCTGCTATGTGTATGGTAATGGAAGAAATGGGCCTTGTGATTGAAGCTCACCACCACGAAG
TAGCCACAGCGGGTCAAAACGAAATTGCTTGCGAATTCAACACGCTAGTTAAAAAAGCGGATGAAATTCAAGTTTATAAG
TATGTTGTGCACAACGTAGCACACGCATACGGCCAAACTGCGACCTTCATGCCTAAGCCACTTGTTGGTGATAACGGTTC
TGGTATGCACTGCCACCAGTCTATCTCTAAAGATGGCGTAAACATCTTTGCGGGTGACAAGTACGCTGGTCTTTCTGAAG
AAGCACTTTACTACATTGGCGGTATTATTAAGCACGCACGTGCAATCAACGCCTTTGCTAACGCTTCAACTAACTCATAC
AAGCGTCTAGTTCCTGGGTTCGAAGCGCCGGTAATGCTTGCATACTCTGCACGTAACCGCTCTGCGTCAATTCGTATCCC
TCACGTAACGAGCGATAAAGCACGTCGTATCGAAGTACGTTTCCCTGACCCAACAGCTAACCCTTACCTTGCGTTCTCAG
CAATGCTAATGGCTGGCCTTGACGGTATTAAGAACAAGATCCACCCTGGCGATGCGATGGATAAAGACTTGTACGACCTA
CCAGCAGAAGAAGCGGCTGAAATTCCAACTGTTGCAAGCTCGCTAGAAATGGCACTTGAAGCACTTGATAACGACCGTGA
CTTCCTTAAAGCGGGTGGCGTTATGACTGACGACATGATTGATGCATACATCGACCTTAAGTCTGAAGAAGTCACTAAAC
TTAACATGACAACTCACCCTGTTGAGTTCGACATGTACTACAGCTTGTAA

Protein sequence :
MSVDKALELIKESEAKFVDLRFTDTKGKEQHVSIPASVVDEEFFEEGKMFDGSSIAGWKGINESDMVLLPDADSCVVDPF
AEETQVNIRCDIVEPSTMEGYERDPRSVARRAEEYLKSTGIGDTCFFGPEPEFFLFDDVRFHTDMAGSFYKIDSSEAKWN
SGEEFEGGNMAHRPGVKGGYFPVPPVDSAHDIRAAMCMVMEEMGLVIEAHHHEVATAGQNEIACEFNTLVKKADEIQVYK
YVVHNVAHAYGQTATFMPKPLVGDNGSGMHCHQSISKDGVNIFAGDKYAGLSEEALYYIGGIIKHARAINAFANASTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPHVTSDKARRIEVRFPDPTANPYLAFSAMLMAGLDGIKNKIHPGDAMDKDLYDL
PAEEAAEIPTVASSLEMALEALDNDRDFLKAGGVMTDDMIDAYIDLKSEEVTKLNMTTHPVEFDMYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-106 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_004428325.1 glutamine synthetase VFG1399 Protein 1e-115 50