Gene Information

Name : lspA (MADE_1012655)
Accession : YP_004427665.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 2914344 - 2914892 bp
Length : 549 bp
Strand : -
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCTTAAGCTTTTTCGCGAAACTGGATTGCGATTTCTATGGATAAGCGCGTTAGCGTTTATCCTAGACCAATGGAGCAA
ATATACGGTCATCGACACTATGTCGCTTTATCAGTCGATTCAAGTGTTACCGTTTTTTAACTTCACGTATGTTCATAACT
ACGGTGCCGCATTTAGCTTTCTAGAAAATGCGGGTGGCTGGCAGCGTTGGTTCTTCACTGCCATTGCTGTTGTGGTAAGT
GTAGTGATTTTGTGGTGGCTTAAGCAGTCACCTCGCTCGCAAAAAATGCTGCCGGTTGCCTTTGCCTTTATTTTAGGTGG
AGCACTAGGTAACGTTTACGACCGTCTAGTTCATGGCTATGTCATCGACTTTTTAGATTTCTACGTAAATAATTACCACT
GGCCAGCATTTAACATTGCCGACAGCGCAATATTTATAGGCGCGGCTTTACTTATTATCGACATGTTTAAAAATGGCGAC
AAGAAAAGTGAAGAAAACGGTGCGGAGTCAAAAGCAGGCTCTGCAAATAGTAGCGAAACCATTAAGTAG

Protein sequence :
MLKLFRETGLRFLWISALAFILDQWSKYTVIDTMSLYQSIQVLPFFNFTYVHNYGAAFSFLENAGGWQRWFFTAIAVVVS
VVILWWLKQSPRSQKMLPVAFAFILGGALGNVYDRLVHGYVIDFLDFYVNNYHWPAFNIADSAIFIGAALLIIDMFKNGD
KKSEENGAESKAGSANSSETIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 4e-22 47
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 2e-17 46
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 4e-17 46
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 3e-17 46
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 9e-19 46
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 9e-19 46
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 9e-19 46
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 1e-18 46
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-18 46