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Name : ribD (MADE_1012450) Accession : YP_004427624.2 Strain : Alteromonas macleodii Deep ecotype Genome accession: NC_011138 Putative virulence/resistance : Unknown Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase Function : - COG functional category : - COG ID : - EC number : 1.1.1.193 Position : 2873148 - 2874287 bp Length : 1140 bp Strand : - Note : riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine a DNA sequence : GTGAACCACGATACGGTTAAAAACGATTATTATTGGATGGCAAAGGCCATTCAACTTGCCAAAAAAGGGCGCTTTACTAC CTCGCCCAACCCCCGCGTTGGCTGCGTGATTGTTGACGAAGACAGTCAGTTGTTAGGCCAAGGTTATCACATCCAAGCGG GCACACCTCATGCCGAAGTACACGCACTTAGACAAGCAGCTCATGCACGTTCTGAAGGTGCCAAAGGTGCAACCGCTTAC GTTACCCTAGAGCCCTGCAGTCATTTTGGGCGTACGCCGCCTTGCGCTAAAGCCCTTGTTGAAGCGCAGGTTGCGCGAGT TGTCATTGCTATGACTGACCCTAACCCGAACGTATGCGGCAACGGTATAAGTATGTTGCAAGAAGCGGGTATTGAAGTGG TGAGCGAGGTAATGGCTGCAGAAGCCGCTGCGCTTAATCCCGGTTTTATAAAGCGTATGCTAACCGGTAAACCCTTTGTT CGCGTAAAGTTGGGCATAAGTGTTGACGGAAAAATAGCCTTGCAAAACGGTGTGAGCCAATGGATTACCACTCCAGAAGC CAGACGAGATGTACAGCACTATCGCGCACAAAGCTGTGTGGTGTTAACGGGGTCGGGTACAGTGAAGGCCGACNATCCTA GCCTTTTAGTACGCGAGAAAGAGGCGCAGTTTGACGATTATCCCCTTGAACATGTTCGCCAGCCTGCTCGGGTTGTGGTA GACAGTAAAAGCACGCTTAGTCGGGACTATGCGCTCTTTAATGACGGCAATATGACCTTTACTGCTACGTCTCAGGCTCA CCCAGATACGGCAAGCCAGCATTACCTTCAGCTTGATGAAAAAGACGGTAAGCTTGACTTACACGCACTAATGTTGGCAT TAGGCGATAAGCAATTTAACGAAGTATGGGTAGAAGCGGGGCCAGGCCTTGCAGGTGCACTCTTGCAAGAAGGGCTGGTG GACGAGCTTATTTGTTACCAAGCGCCTAAGCTATTAGGTGATAAAGGGGTAAGTATGGTCAATTTGCCAGCGTTTACCGC TTTAAATCAATCTATTTCACTTTCACTTATTGAAAATCGTCAGGTGGGTAACGATATTAAGCTTATCTTCCGGCCCGACG TTAGCAACACCTGTCGCTAA Protein sequence : MNHDTVKNDYYWMAKAIQLAKKGRFTTSPNPRVGCVIVDEDSQLLGQGYHIQAGTPHAEVHALRQAAHARSEGAKGATAY VTLEPCSHFGRTPPCAKALVEAQVARVVIAMTDPNPNVCGNGISMLQEAGIEVVSEVMAAEAAALNPGFIKRMLTGKPFV RVKLGISVDGKIALQNGVSQWITTPEARRDVQHYRAQSCVVLTGSGTVKADXPSLLVREKEAQFDDYPLEHVRQPARVVV DSKSTLSRDYALFNDGNMTFTATSQAHPDTASQHYLQLDEKDGKLDLHALMLALGDKQFNEVWVEAGPGLAGALLQEGLV DELICYQAPKLLGDKGVSMVNLPAFTALNQSISLSLIENRQVGNDIKLIFRPDVSNTCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-60 | 47 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-60 | 47 |
