Gene Information

Name : MADE_1010695 (MADE_1010695)
Accession : YP_004427275.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : -
Position : 2381268 - 2382560 bp
Length : 1293 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTTAGATCCAAAGTGTTTGCGAAGCGATATAGAACAAACAGCTAAGCGATTAGCTGCCCGTGGTTTTAACCTCGACGT
AGCAGCTTTCAGTTCGCTTGAAGAAAAAAGAAAAACACTTCAGTCCAGAACACAGGATCTGCAAAACGAGCGTAATGTAC
GAAGTAAATCCATTGGTAAGGCAAAAGCGCAGGGTGAAGATATTGCGCCGCTTTTAGCTGAAGTGGGTAAACTTGGCGAC
GAGCTTGATGCCGCTAAAGCAGAGCTTAGCGAACTGTTAGAAGAAATTAATACCCTTACGCAAGGCATTCCTAATTTGCC
GCATGAGTCGGTACCAGAAGGGAAAGACGAAGACGACAACGTTGAAATTTCCCGTTGGGGTGAGCCGCGTACGTTTGATT
TTGAAGTAAAAGATCACGTAGACGTAGCTGAAGGCTTAAACAACGGCCTAGATTTCGCGACCGCGAGTAAGCTAACAGGC
AGCCGCTTTGTGGTAATGCGTGGCGATATTGCTCGTTTAAACCGTGCGCTTGCTCAGTTCATGCTAGATACCCATACTCA
AGAGCATGGCTATCAGGAAATGTACGTGCCTTATCTTGTCAATGCCGACAGCCTATACGGTACAGGTCAGTTGCCTAAGT
TTGGTGAGGATCTATTCCACACTAAGCCAGCAACGGAAGAGGGGCAGGGGCTAAGTCTAATTCCAACGGCGGAAGTACCG
CTAACAAACATCGCCCGTGATGAAATTTTAGATGCTAAAACGCTGCCTGTGAAAATGACGGCACACACACCGTGCTTCCG
CTCAGAAGCGGGTTCGTACGGTCGTGACACCCGTGGTCTCATTCGTCAGCATCAATTCGACAAGGTAGAACTAGTACAGC
TAGTTAAGCCAGAAGATAGCTTCGACGCGCTAGAAGCGCTTACTGGCCATGCGGAAGTTATTCTGCAAAAGCTAGAGCTA
CCTTACCGCAAAGTGTTGCTATGTACGGGTGACATGGGCTTTGGTGCATGTAAAACCTATGATCTTGAAGTATGGCTACC
TGCACAGAATACTTACCGCGAAATCTCTTCATGCTCAAACATGCTGGATTTCCAAGCGCGACGTATGCAGGCAAGGTTCC
GCAACCCTGAAACCAATAAACCTGAACTGCTACACACACTGAACGGTTCTGGTTTGGCAGTAGGGCGTACACTTGTTGCT
ATTTTAGAGAATAACCAACAGGCAGACGGTAGTGTTACTGTACCTAAAGCGCTTGTGCCTTACATGGCTGGTCAGGAAGT
GATTAAGGCGTAG

Protein sequence :
MLDPKCLRSDIEQTAKRLAARGFNLDVAAFSSLEEKRKTLQSRTQDLQNERNVRSKSIGKAKAQGEDIAPLLAEVGKLGD
ELDAAKAELSELLEEINTLTQGIPNLPHESVPEGKDEDDNVEISRWGEPRTFDFEVKDHVDVAEGLNNGLDFATASKLTG
SRFVVMRGDIARLNRALAQFMLDTHTQEHGYQEMYVPYLVNADSLYGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVP
LTNIARDEILDAKTLPVKMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDSFDALEALTGHAEVILQKLEL
PYRKVLLCTGDMGFGACKTYDLEVWLPAQNTYREISSCSNMLDFQARRMQARFRNPETNKPELLHTLNGSGLAVGRTLVA
ILENNQQADGSVTVPKALVPYMAGQEVIKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 1e-104 56