Gene Information

Name : MADE_1010515 (MADE_1010515)
Accession : YP_004427239.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2349541 - 2350041 bp
Length : 501 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGCATCAGTTACTTTTCAAGGTAATGCAGTTTCAACTATTGGTCAGCTACCAGAAGTTGGCGCGAAAGCACCTGACTT
CACTCTAGTGAAAGCAGATTTGGGCGAAGTAACACTGTCTGAGCTTGCGGGGAAAAACATTGTTCTAAATATTTTTCCTT
CAATCGATACCGGTACGTGCGCTATGTCGGTTCGTAAATTTAATGAGGAAGCGGCAAAACTAGATAATACCACTGTTATT
TGTGTTTCAGCAGATCTACCGTTTGCGGCTGGGCGTTTTTGCGGTGCTGAAGGTATTGAAAACGTACTTACAGGTTCTAC
ATTCCGCTCAACCTTCGGCGATGACTACGGCGTAACGTTTGAGTCAGCGCCGCTTACCGGTCTACTTTCCCGTTCGGTTG
TTGTTATTGATACTGAAGGCAAAGTTGTTTACACAGAACAAGTTGCTGAAACAACAGAAGAGCCAAACTACGATGCAGCT
ATTGCTGCACTAAGCGAATAA

Protein sequence : 
MASVTFQGNAVSTIGQLPEVGAKAPDFTLVKADLGEVTLSELAGKNIVLNIFPSIDTGTCAMSVRKFNEEAAKLDNTTVI
CVSADLPFAAGRFCGAEGIENVLTGSTFRSTFGDDYGVTFESAPLTGLLSRSVVVIDTEGKVVYTEQVAETTEEPNYDAA
IAALSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 4e-31 43
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-31 43
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-31 43
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-31 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MADE_1010515 YP_004427239.1 thiol peroxidase VFG0087 Protein 6e-32 43