Gene Information

Name : MADE_1010250 (MADE_1010250)
Accession : YP_004427186.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 2298789 - 2299205 bp
Length : 417 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAAAATAGGACAGTTAGCAGATAAAACAGGCCTAAGTATTCAAACTATTCGCTTTTATGAACGAAAGGCGTTGTTAGC
AGCACCACAGCGCACGCAATCGAATTATCGACTTTACTCGGACGAAGCGCTAAAGCAGTTGCTGTTTATTAAGCAATGCC
GAGCGCTGGATATGACGATTGAAGAAATTAATTTGGTTCTAAAAACACGAGCTAACCCAGAGAGCAGTTGCGAGAGTGTC
AATGCGACAATTGATAAGCATATTGAGGATATCGAAAGTCGCATCATTGAGTTGAATGCATTACAAAAGACACTTCTTTC
ATTTCGTTCAGCTTGTGAGGATGATAAAAAAGTAAAAGACTGCGGCGTCTTACAGCAGTTGGATAATATCGTTACTTCTA
GAACGTCATCCAATTAA

Protein sequence : 
MKIGQLADKTGLSIQTIRFYERKALLAAPQRTQSNYRLYSDEALKQLLFIKQCRALDMTIEEINLVLKTRANPESSCESV
NATIDKHIEDIESRIIELNALQKTLLSFRSACEDDKKVKDCGVLQQLDNIVTSRTSSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 3e-30 45
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-29 45
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 4e-30 45
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 3e-30 45
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-29 45
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 9e-30 45
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 9e-30 45
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 6e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MADE_1010250 YP_004427186.1 MerR family transcriptional regulator BAC0058 Protein 2e-30 48
MADE_1010250 YP_004427186.1 MerR family transcriptional regulator BAC0301 Protein 4e-27 46