Gene Information

Name : MADE_1010210 (MADE_1010210)
Accession : YP_004427178.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Unknown
Product : deoxyribodipyrimidine photo-lyase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0415
EC number : -
Position : 2288985 - 2290409 bp
Length : 1425 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGACCATTCCTGTAAGCATTATGTGGTTTAGACAAGACCTTCGCGTAAAAGACAACCCTGCATTGAATGCAGCGTGTGA
CATGGGAAAAATCGTTCCCATCTACATATTTGATGAAAGTGCGCCAGATGGCAGAATGCCTGGCGGTGCAAGCAAGTGGT
GGCTTCACCATTCGTTAAAATCTTTAAACAAACGGCTGAACGGTCATCTACAAATTTTTAAAGGCGATCCACAAACTCTC
ATTCCAAAGCTTATGGAGTCCTTTAATGCATCGTCTATCTTTTGGAACCGGTGTTACGAGCCATGGCAAATTAACCGTGA
CAAAGCCATTAAAAAGTCACTTCTAGGTAGTGACTACGAGGCGCATAGCTTTAACGGTAGTTCATTGTGGGAGCCAATGA
AGGTACTCAAAAAAGATGGCACGCCTTATCGAGTTTTTACCCCTTACTACAAAAATGGCTGTCTACAGATTGAAGAGCCA
CGCTACCCGAAGGCACCTCCAGCACGTATTACCTATGCAGATGTTGACGATAACAGCGATGGCTTAGCCGCGTTAGCGTT
GCTTCCGACCATAAAATGGGATGACACCATTGCCAAGGAGTGGACGCCTGGCGAAGATGGCGCGGCAGATAATCTGTCTG
ACTTTATTGAAAACTCAGCACGAAGGTATAAAGACGGCAGAGACATTCCTTCGGCGAAAGGAACTTCACGACTGTCACCG
CATTTACATTTTGGCGAAGTGTCACCAAACCAAGTTTGGTATGCCATAAAAGATAGGTTCGGGACTAGCGAAGACAAAAG
TATCGAGACTTATCTCAGTGAACTTGGTTGGCGAGAATTCAGCTATTACCTTCTGTTTCACTTTCCTACGCTACCGAATA
AAAACTTCAACGATAAGTTTGATAAATTTCCATGGCGTACTGACGCAAAAGCGCTAAAAGCGTGGCAAACCGGTAATACA
GGAATTCCTATTGTTGATGCGGGTATGCGTGAACTGTGGCAAACAGGCTACATGCACAACCGCGTTCGCATGATTGTGGG
GTCATTTTTAGTCAAAAATTTGTTATTGAGCTGGCATGAAGGTGAACGCTGGTTTTGGGATACCTTACTTGATGCCGACT
TAGCCAGTAATAGCGCTAGTTGGCAATGGGTAGCAGGCTCAGGGGCAGATGCCGCACCGTACTTCAGAATTTTTAATCCC
ATCCTCCAAGGTGAAAAGTTTGATAAGAAAGGCGGCTATGTTCGTCAATATTGCCCCGAACTAAATGGACTGTCTGATAA
ATACATCCACAAGCCCTGGGAAGCACCATCTGCTATATTGAAAGAGGCGGGTGTTGAGCTTGGTAAGGATTACCCTAAGC
CTATTGTTGATTTAAAGGCATCACGCCAGCGAGCACTAGACGCGTTTCAAACATTAAAAGAGTAG

Protein sequence :
MTIPVSIMWFRQDLRVKDNPALNAACDMGKIVPIYIFDESAPDGRMPGGASKWWLHHSLKSLNKRLNGHLQIFKGDPQTL
IPKLMESFNASSIFWNRCYEPWQINRDKAIKKSLLGSDYEAHSFNGSSLWEPMKVLKKDGTPYRVFTPYYKNGCLQIEEP
RYPKAPPARITYADVDDNSDGLAALALLPTIKWDDTIAKEWTPGEDGAADNLSDFIENSARRYKDGRDIPSAKGTSRLSP
HLHFGEVSPNQVWYAIKDRFGTSEDKSIETYLSELGWREFSYYLLFHFPTLPNKNFNDKFDKFPWRTDAKALKAWQTGNT
GIPIVDAGMRELWQTGYMHNRVRMIVGSFLVKNLLLSWHEGERWFWDTLLDADLASNSASWQWVAGSGADAAPYFRIFNP
ILQGEKFDKKGGYVRQYCPELNGLSDKYIHKPWEAPSAILKEAGVELGKDYPKPIVDLKASRQRALDAFQTLKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0113 NP_938509.1 riboflavin biosynthesis protein Not tested Not named Protein 3e-70 41