Gene Information

Name : MADE_000001022020 (MADE_000001022020)
Accession : YP_008549840.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Unknown
Product : RND transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2269802 - 2272120 bp
Length : 2319 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGACCCATTTCCTTGAAAAATTAGTGTTTGGTAACCGAAAGATTGTGGTGGCGTTATTCACCATTGCGACGGTTTTTCT
AGGTTACCAAGCCTCACAAATGCGCCTAGACGCAGGTTTTGAAAAAAACATTCCGCTAAATCACGAATACATGAAAACCT
ATATTGAGCATCGCCAAGATTTTGGTGGGGCAAATAATATTCTAGTATCCGTGTGTGATAAAAACGACAATATCTATAAT
CAAAACTTCTTCGATACCCTTAAGAATGTTCACGATCAGTTGTTTTTTATTAATGGTGTTAACCGTTCTCTGGTTATTTC
TCTTTTTTCTCCGTCAACCCGCTTTACCGAGATTGTAGAGGGCGGATTTGCTGGCGGGCCTGTAATTCCGGCTGATTTCA
ATTCATCTAATCCCGAAGCCCTAGAGCTTGTTGCAGCAAACGTTGAGAAGGCCAATATTGTTGGTCGACAAGTTTCAAGC
GATTACAGCTGCGCCATGGTGACAGCCCAACTGCTTGATATTGACCCTCAAACCGGTGAGCCGCTAGACACCCTAGCACT
GGCAGCAGAGCTTGAAGAGCAACTTCGCGGTCAATACGAAAACGATAACACTTCTATTCATATTATCGGCTTCGCGAAAA
TGATTGGCGATGTGGCGGATGGTGCAAAAGACGTACTGGTCTTTTTCGCCATAGCTATCGCTATCACAGCGGTTATGGTG
TATTTCTTCTCTCGAAGCATTATGCTCACTATTTTACCGTTAGTATGTTCGATTATTGCGGTTATTTGGCAGCTCGGGTT
ATTGACTTCAATTGGCTTTGGTATGGACCCTATGTCAATTTTGGTTCCATTCCTTGTATTTGCGATTGGTGTAAGTCACG
GCGTACAGATGATCAATGCGGTAGAAAAGCACGCGGTAACAGGCATTGGTGCAAAACGTGCCTCGATGGCGGCGTTTAGA
AACTTGTTGGTTCCAGGCGGAATAGCGCTGTTGTCCGATACAGTAGGCTTTATGACACTACTGGTTATCGATATCGGTAT
CATTCGTGAACTGGCAATAACAGCGAGTATGGGTGTGGCGGTAATTATACTTACCAACCTATTACTGCTTCCTGTATTGA
TGAGTTTCTTGAAACTTGACCAAAAGTATGTAGAAAAATTTGCGGGTAAGGAAAACGCCAATTCAAAATTCTGGGAAGTG
ATTGCATCTTGTTCGCGTAAAAAGCCGGCGGCAATCATCTTAATTGTCACCGCTATCTTATTTGTATTCGGGCACTTCCA
AGCTCAGAATATGAAAATAGGGGACTTGCATGCTGGTGCACCTGCACTTCATGAGACGTCGCGATACAACCAAGACACTT
TCCTTATTACCGACAAGTACGAAGTTACGGTCGATTACATTTCCATTTTGGTAGAAACTACGCCAGAGGCATGTACATCG
CATAGCGTGATGAAGGCCATGGATGACTTCCAGTGGAAAATGGAAAACGTACAAGGTGTTCAATCGGCAGTATCGTTGGC
CTCGGTAGCGAAAATTGTAAATGCAGGTTACAACGAAGGTAACGTCAAGTGGCAAGTCATTCCGCGCAACCAGCAAACCT
TAGTTCAAGCTATTTCTCGTGTTCCAACATCATCAGGTCTATTAAACGGCGACTGCTCGGTCATGCCTATAATCCTGTTT
ATGGAAGATCATAAAGCTGAAACGATTTCTCGCGTCGTTGACGCCGTTAAGTCATATCGCGCTGAATACCAAAGTGACGA
TATGAAGTTTAGCTTAGCGTCTGGCCCAGTGGGTGTAATGGCCGCAACTAATGAAGCAGTGAGTGCAGCGCAAGACCCAA
TGATGCTTTACGTGTTCGGTGCGGTAATTGCGCTATGTCTTATTAGCTTCCGCTCAATCAGAGCGACCTTAGTAGTGGTT
ATCCCACTTTACGTGGTGTCAGTATTGGCCCAAGCACTGATGACATACCTTCAAATTGGCCTCACCGTTTCTACGTTACC
AGTTATCGCACTTGGCGTGGGCATCGGAGTGGACTATGGTATTTATATACTCTCTACGAAGAGCTTAATGTTGAAGAAAG
GTGCGACGGTGCAAGAAGCTTATTTCGCCGCACTTAAAGAGCGTGGAAGCGCTGTTTTATTTACCGGTATTACGCTAGCA
ATAGGCGTGAGCACATGGGTGTTCTCATCACTTAAGTTCCAGATGGATATGGGTATACTGCTTACATTTATGTTCGTAGT
AAACATGCTTGGGGCAATAATTGTACTGCCCGCACTTGCAAGATTCCTATGGTGGAATAAGAACGACCCCGGTGCATAA

Protein sequence :
MTHFLEKLVFGNRKIVVALFTIATVFLGYQASQMRLDAGFEKNIPLNHEYMKTYIEHRQDFGGANNILVSVCDKNDNIYN
QNFFDTLKNVHDQLFFINGVNRSLVISLFSPSTRFTEIVEGGFAGGPVIPADFNSSNPEALELVAANVEKANIVGRQVSS
DYSCAMVTAQLLDIDPQTGEPLDTLALAAELEEQLRGQYENDNTSIHIIGFAKMIGDVADGAKDVLVFFAIAIAITAVMV
YFFSRSIMLTILPLVCSIIAVIWQLGLLTSIGFGMDPMSILVPFLVFAIGVSHGVQMINAVEKHAVTGIGAKRASMAAFR
NLLVPGGIALLSDTVGFMTLLVIDIGIIRELAITASMGVAVIILTNLLLLPVLMSFLKLDQKYVEKFAGKENANSKFWEV
IASCSRKKPAAIILIVTAILFVFGHFQAQNMKIGDLHAGAPALHETSRYNQDTFLITDKYEVTVDYISILVETTPEACTS
HSVMKAMDDFQWKMENVQGVQSAVSLASVAKIVNAGYNEGNVKWQVIPRNQQTLVQAISRVPTSSGLLNGDCSVMPIILF
MEDHKAETISRVVDAVKSYRAEYQSDDMKFSLASGPVGVMAATNEAVSAAQDPMMLYVFGAVIALCLISFRSIRATLVVV
IPLYVVSVLAQALMTYLQIGLTVSTLPVIALGVGIGVDYGIYILSTKSLMLKKGATVQEAYFAALKERGSAVLFTGITLA
IGVSTWVFSSLKFQMDMGILLTFMFVVNMLGAIIVLPALARFLWWNKNDPGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01517.1 transport protein Not tested PAGI-1 Protein 1e-122 42