Gene Information

Name : MADE_1008860 (MADE_1008860)
Accession : YP_004426908.2
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1932094 - 1932993 bp
Length : 900 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGATAACCTGCTGCCGTGGTCTCAATTGCTGGAAGTGATTGAACCCTTTTATCCTAAAGCAGGCAATGGCAGACGTCC
ATATGCGCTTGAGACCATGTTTCGCATTCACTGTATGCAGCAATGGTATAGCCTCGGTGATGAAGCGATGGAAGATGCGT
TATATGAAATTGCTTCGATGCGTCAGTTTGCGCAACTGTCACTGGATAAAGCCATTCCTGACCGCACCACCATTATGAAC
TTCCGTCACTTGCTGGAAAAGCACAAGCTGACTCGCCAATTATTCAAAACGGTCAACCAATGGCTGTCGGAGTGCGGTGT
GATGATGACGCAGGGTACACTGGTGGATGCGACGATTATTGAAGCTCCCAGCTCCACCAAGAATAAAAAGAATGAGCGTG
ACCCGGATATGCACCAGACCAAAAAAGGTAATGAATGGCACTTCGGCATGAAAGCCCATATAGGAGTGGATGCCAAGAGT
GGCCTGACGCATACGCTGGTGACCACTGCCGCCAACGAACATGACCTGAATCAGATGAAGAACCTGTTGCATGGCGATGA
GGAATTCATCTCTGGCGATGCTGGATATCAAGGCGCAGAGAAGCGTGAAGAACTTAAAGAAAAGGATGTGGAATGGCTGA
TTGCTGAGCGTCCCGGAAAGGTTCGGGCACTGAAAAAGCATCCCCGCAAAAACAAAACTGCCATCAACATCGAATATTTA
AAAGCCAGCATCCGAGCAAAAGTTGAACACCCGTTTCGCATCATCAAATGTCAGTTCGGCTTTATCAAAGCACGCTATAA
AGGGCTGACAAAAAATGACTCACAGTTAGCCATGCTATTCACCTTGGCGAACCTGTTTAAAGTAGACCAGATGTTACGAC
GACAGCCAAGATCTGTCTGA

Protein sequence :
MDNLLPWSQLLEVIEPFYPKAGNGRRPYALETMFRIHCMQQWYSLGDEAMEDALYEIASMRQFAQLSLDKAIPDRTTIMN
FRHLLEKHKLTRQLFKTVNQWLSECGVMMTQGTLVDATIIEAPSSTKNKKNERDPDMHQTKKGNEWHFGMKAHIGVDAKS
GLTHTLVTTAANEHDLNQMKNLLHGDEEFISGDAGYQGAEKREELKEKDVEWLIAERPGKVRALKKHPRKNKTAINIEYL
KASIRAKVEHPFRIIKCQFGFIKARYKGLTKNDSQLAMLFTLANLFKVDQMLRRQPRSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 2e-68 56
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 1e-68 56
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 2e-77 54
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 2e-77 54
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 3e-75 54
unnamed AAO33449.1 putative transposase Not tested Not named Protein 1e-61 53