Gene Information

Name : hemC (MADE_1000740)
Accession : YP_004425295.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 160122 - 161060 bp
Length : 939 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGTCATCTCAACACCACCCGCACCGTTCGAATTGCTACTAGAAAAAGTGCCTTAGCGCTTTGGCAAGCAGAGTATGT
GAAGGCAAAATTGTTGGAGCATTACCCATCAATGACCGTTGAGCTTGTGCCCATGAGCACCCAAGGCGATAAAATTCTCG
ATACGCCGCTGGCCAAAATTGGCGGCAAAGGCCTTTTTATCAAAGAGCTTGAAATTGCCATGCTTGAAGGCCGTGCCGAT
ATTGCTGTGCACTCAATGAAAGACGTACCGGTAGAATTCCCGGAAGGCTTTGGGTTACACGCTATATGTGAGCGTGAGAA
TCCGTTCGATGCCTTCGTGTCTAACAACCACGACAGCCTAGATGCACTGCCAGAAGGCGCAATAGTGGGTACATCTAGCC
TACGCAGACAATGTCAAATTCGCAAATACCGCCCTGATCTAATCATCAAGGACCTTCGCGGTAACGTAAATACCCGTTTA
GCTAAGCTTGATGCAGGCGAATACGACGCCATTATTTTAGCCTCTGCAGGGCTTATTCGCCTTAAAATGCAATCGCGTAT
TCGCATGGCTCTGCCTGCTGACATCTCTCTTCCGGCTGTAGGCCAAGGCGCTGTAGGCATTGAATGTCGCAACGACGATG
AAGAACTAATAGCGCTACTTCAAGCATTAAACCACGCAGATACGCACACCCGTGTTACTGCAGAACGCGCCATGAATGAA
AGGCTAGAAGGCGGATGCCAAGTCCCTATTGGCAGTTTTGCTACACTGGATAACGATGTGCTAACGCTCACTGGCATGGT
AGGAAAGCCCGATGGCTCTGAGCTTCTTTTTGCCTCAGCTACCGCGTCTAGAGAGAAAGCCAAAGACATGGGTATTGAGG
TAGCTGAAGCCCTTTTAGAGCAAGGTGCTGGCGAAATTTTGAAAGCACTTTATAGCTAA

Protein sequence :
MSHLNTTRTVRIATRKSALALWQAEYVKAKLLEHYPSMTVELVPMSTQGDKILDTPLAKIGGKGLFIKELEIAMLEGRAD
IAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDALPEGAIVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRL
AKLDAGEYDAIILASAGLIRLKMQSRIRMALPADISLPAVGQGAVGIECRNDDEELIALLQALNHADTHTRVTAERAMNE
RLEGGCQVPIGSFATLDNDVLTLTGMVGKPDGSELLFASATASREKAKDMGIEVAEALLEQGAGEILKALYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 7e-87 62
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 7e-87 62