Gene Information

Name : MADE_1005845 (MADE_1005845)
Accession : YP_004426309.2
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1175469 - 1176272 bp
Length : 804 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GTGACAGCAGAGAAGCGAGAGTGCGCCAGCATACTAGTTGATGCGGGGCTGAGTATCGTAAAGGCTTGCCTATTTGTTGG
TATTAGCCGTTCGACCTTCTACCGCCCCGAACGAGACTGGCGCAAAGCAGATGCTGCTGTCATTGATGCTATCAATGCTG
TGCTTGATAAGTCGCCACGAGCAGGCTTCTGGAAGTGCTTTGGCCGAATGCGTTTCAAAGGCTTTCCGTTCAACCATAAG
CGCGTTTATCGCGTGTATTGTCAAATGGGATTGAATTTAAGGCGCAGAACCAAACGTGTGCTCCCTAAACGAATAGCACA
GCCGCTGGAAGTCTTGGAGCAAGCGAACTACCAATGGGCGTTGGACTTTATGCATGACACTTTATACTGCGGTAAGCGGT
TCAGAACATTAAATGTGGTGGATGAAGGAACACGGGAATGCTTAGCCATTGAAGTAGACACCTCATTACCTGCTGGCCGC
GTAGTACGCGTATTAGAACAGCTTAAAACTGAACGCGGATTGCCTAAGCAACTGCGCATGGATAATGGCCCCGAGCTAAT
TTCAGCGACGCTAACAGATTGGTGTCAGAACCATAATATTGAACTGTTATATATTCAGCCAGGCAAGCCACAGCAAAATG
GCTTTGTAGAACGCTTTAATGGTTCATTCCGCAGAGAGTTTCTCGATGCCTACTTGTTTGAGAATATCGGCCAGGTGAGA
GAAATGTCTTGGTTCTGGCGACTAGATTATAACGAAGAGAGAACTCATGAAAGTCTCGGAAATCTGCCTCCGGCAGCTTA
CTGA

Protein sequence :
MTAEKRECASILVDAGLSIVKACLFVGISRSTFYRPERDWRKADAAVIDAINAVLDKSPRAGFWKCFGRMRFKGFPFNHK
RVYRVYCQMGLNLRRRTKRVLPKRIAQPLEVLEQANYQWALDFMHDTLYCGKRFRTLNVVDEGTRECLAIEVDTSLPAGR
VVRVLEQLKTERGLPKQLRMDNGPELISATLTDWCQNHNIELLYIQPGKPQQNGFVERFNGSFRREFLDAYLFENIGQVR
EMSWFWRLDYNEERTHESLGNLPPAAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 1e-51 48
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 3e-32 42