Gene Information

Name : MADE_1005840 (MADE_1005840)
Accession : YP_004426308.2
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1175203 - 1175472 bp
Length : 270 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAAAAATCACGCTATACAGAATCTCAGATCATCGGAGTCTTAAAAGAAGTCGATGCTGGTAGAAAAGTTGAAGAAGT
GTGCCGCCAACACGGTATTAGCAGTGCCACTTATTACAACTGGAAGTCCAAATACGGTGGCATGGAAGCGTCTGACGTTA
AAAGACTGAAAGAGCTTGAAGAAGAAAATGCCAAGCTAAAGAAGATGTTCGCTGACGTTAGCCTAGAAGATAATGCGATT
AAGGAGCTTGTCGCAAAAAAGGGTTGGTGA

Protein sequence :
MKKSRYTESQIIGVLKEVDAGRKVEEVCRQHGISSATYYNWKSKYGGMEASDVKRLKELEEENAKLKKMFADVSLEDNAI
KELVAKKGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 6e-20 63
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-13 55
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 9e-14 55
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 2e-13 48
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-13 48
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-13 48
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 3e-13 47