Gene Information

Name : MADE_1005535 (MADE_1005535)
Accession : YP_004426247.1
Strain : Alteromonas macleodii Deep ecotype
Genome accession: NC_011138
Putative virulence/resistance : Resistance
Product : alkylmercury lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1120678 - 1121310 bp
Length : 633 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAAAATTAGTATGAAACATACCCGCTACCTCACCAAGATTGCAGAAAGTCTGACGCCAGCCAATCAGCCCCAAGGCTT
CGGGGAACTGTTCGTCGTGCTGCTGCGTGAGCTTGCCAAGGGGCGTCCAGTTTCACGAACGACGCTTGCCAAGTCTCTCG
ACTGGCCTGCTCAGCAAGTGAATGCGGTACTCGAACGGACGACTAGTACCGAGTACGATAGTGATGGGAATATTGTTGGT
TATGTCCTCACCTTGCGCGAGACTTCGCATATCTTTGAGATTGACGGCCGCCGTCTATACGCTTGGTGCGCACTGGACAC
TCTGATGCTTCCGGCCCTCATCGGCCAGACGGCGCGCGTGACGTCGCATTGCGCTGCAACCGGGGCGCCAGTTTCCCTCA
CGGTTTCGCCGAACGAAATCCGGGATATCGCACCGACCGACGCCGCAGTGTCGTTGGTACTGCCGCAGGAAACAGCGGAC
ATTCGTCGGTCATTCTGTTGCCACGTCCATTTCTTTGCATCGGCCGTGACGGCGAAAGATTGGGCCTCCAAGCATGAAGG
AGTGGAGATCGTAAGCGTCCAAGATGGCTTCCGCTTGGGCCAAGAGCTTAATCGACATCTGCTGCAGATATAG

Protein sequence : 
MKISMKHTRYLTKIAESLTPANQPQGFGELFVVLLRELAKGRPVSRTTLAKSLDWPAQQVNAVLERTTSTEYDSDGNIVG
YVLTLRETSHIFEIDGRRLYAWCALDTLMLPALIGQTARVTSHCAATGAPVSLTVSPNEIRDIAPTDAAVSLVLPQETAD
IRRSFCCHVHFFASAVTAKDWASKHEGVEIVSVQDGFRLGQELNRHLLQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0086 NP_763641.1 alkylmercury lyase Not tested SCCpbp4 Protein 7e-40 47
merB BAB47641.1 organomercurial lyase Not tested Type-III SCCmec Protein 1e-39 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MADE_1005535 YP_004426247.1 alkylmercury lyase BAC0659 Protein 1e-68 72
MADE_1005535 YP_004426247.1 alkylmercury lyase BAC0657 Protein 2e-61 57
MADE_1005535 YP_004426247.1 alkylmercury lyase BAC0658 Protein 7e-40 47
MADE_1005535 YP_004426247.1 alkylmercury lyase BAC0663 Protein 1e-37 45
MADE_1005535 YP_004426247.1 alkylmercury lyase BAC0654 Protein 9e-38 45