Gene Information

Name : vicR (Sez_1396)
Accession : YP_002123745.1
Strain : Streptococcus equi MGCS10565
Genome accession: NC_011134
Putative virulence/resistance : Virulence
Product : TCS response regulator VicR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1434932 - 1435642 bp
Length : 711 bp
Strand : -
Note : similar to emb|CAB65451.1| VicR protein [Streptococcus pyogenes]

DNA sequence :
ATGAAGAAAATACTGATTGTTGATGATGAAAAGCCGATTTCTGATATCATTAAATTTAATCTGACAAAGGAAGGCTATGA
TACGGTCACAGCCTTTGATGGCAAAGAGGCCGTTGCAGTCTTTGAAGAGGAAAAGCCAGATTTGATTATTTTGGATTTGA
TGCTTCCTGAGCTAGATGGTCTTGAGGTAGCCAAGGAAATCCGCAAGACCAGCCATATTCCTATCATCATGCTATCTGCT
AAGGATAGCGAATTTGATAAGGTGATTGGCCTTGAAATAGGGGCCGATGATTATGTGACTAAGCCCTTTTCAAATCGTGA
GCTGCTGGCGCGTGTCAAGGCACATTTGCGTCGGACAGAGACTATTGAGACAGCAGTAGCCGAAGAAAATGCCTCCTCAG
GCTCTCAGGAGCTGACCATCGGCAATCTACAGATTTTGCCAGATGCCTTTATTGCTAAAAAGCATGGTCAAGAGGTTGAG
CTGACCCATCGTGAGTTTGAATTGCTGCATCATCTGGCAAACCATATCGGACAGGTCATGACACGTGAGCATTTGCTTGA
GACCGTATGGGGCTACGATTATTTTGGCGATGTCCGAACCGTTGACGTTACTATCCGTCGCCTGCGCGAAAAAATAGAGG
ATACACCGAGTCGTCCAGAGTATATTTTGACAAGACGTGGTGTTGGGTACTACATGAAGGCTTATGACTAA

Protein sequence :
MKKILIVDDEKPISDIIKFNLTKEGYDTVTAFDGKEAVAVFEEEKPDLIILDLMLPELDGLEVAKEIRKTSHIPIIMLSA
KDSEFDKVIGLEIGADDYVTKPFSNRELLARVKAHLRRTETIETAVAEENASSGSQELTIGNLQILPDAFIAKKHGQEVE
LTHREFELLHHLANHIGQVMTREHLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPEYILTRRGVGYYMKAYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-39 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 8e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_002123745.1 TCS response regulator VicR NC_012469.1.7685629. Protein 3e-89 78
vicR YP_002123745.1 TCS response regulator VicR HE999704.1.gene2815. Protein 8e-55 53
vicR YP_002123745.1 TCS response regulator VicR NC_002952.2859905.p0 Protein 6e-55 52
vicR YP_002123745.1 TCS response regulator VicR NC_009782.5559369.p0 Protein 8e-55 52
vicR YP_002123745.1 TCS response regulator VicR NC_002951.3237708.p0 Protein 8e-55 52
vicR YP_002123745.1 TCS response regulator VicR NC_002758.1121668.p0 Protein 8e-55 52
vicR YP_002123745.1 TCS response regulator VicR NC_009641.5332272.p0 Protein 8e-55 52
vicR YP_002123745.1 TCS response regulator VicR NC_013450.8614421.p0 Protein 8e-55 52
vicR YP_002123745.1 TCS response regulator VicR NC_007793.3914279.p0 Protein 8e-55 52
vicR YP_002123745.1 TCS response regulator VicR NC_007622.3794472.p0 Protein 6e-55 52
vicR YP_002123745.1 TCS response regulator VicR NC_002745.1124361.p0 Protein 8e-55 52
vicR YP_002123745.1 TCS response regulator VicR NC_003923.1003749.p0 Protein 5e-55 52
vicR YP_002123745.1 TCS response regulator VicR NC_012469.1.7686381. Protein 2e-47 49
vicR YP_002123745.1 TCS response regulator VicR AE016830.1.gene1681. Protein 2e-48 48
vicR YP_002123745.1 TCS response regulator VicR FJ349556.1.orf0.gene Protein 2e-42 45
vicR YP_002123745.1 TCS response regulator VicR AF155139.2.orf0.gene Protein 7e-42 44
vicR YP_002123745.1 TCS response regulator VicR AF162694.1.orf4.gene Protein 6e-38 43
vicR YP_002123745.1 TCS response regulator VicR AM180355.1.gene1830. Protein 6e-41 43
vicR YP_002123745.1 TCS response regulator VicR DQ212986.1.gene4.p01 Protein 1e-40 43
vicR YP_002123745.1 TCS response regulator VicR AE015929.1.gene1106. Protein 2e-33 42
vicR YP_002123745.1 TCS response regulator VicR BAC0533 Protein 4e-33 42
vicR YP_002123745.1 TCS response regulator VicR NC_002695.1.915041.p Protein 1e-32 42
vicR YP_002123745.1 TCS response regulator VicR CP000647.1.gene4257. Protein 4e-33 42
vicR YP_002123745.1 TCS response regulator VicR CP000034.1.gene3834. Protein 1e-32 42
vicR YP_002123745.1 TCS response regulator VicR NC_014475.1.orf0.gen Protein 3e-40 42
vicR YP_002123745.1 TCS response regulator VicR NC_005054.2598277.p0 Protein 3e-40 42
vicR YP_002123745.1 TCS response regulator VicR NC_002952.2859858.p0 Protein 4e-37 41
vicR YP_002123745.1 TCS response regulator VicR NC_007622.3794948.p0 Protein 4e-37 41
vicR YP_002123745.1 TCS response regulator VicR NC_003923.1003417.p0 Protein 4e-37 41
vicR YP_002123745.1 TCS response regulator VicR NC_013450.8614146.p0 Protein 4e-37 41
vicR YP_002123745.1 TCS response regulator VicR NC_002951.3238224.p0 Protein 4e-37 41
vicR YP_002123745.1 TCS response regulator VicR NC_007793.3914065.p0 Protein 4e-37 41
vicR YP_002123745.1 TCS response regulator VicR NC_002758.1121390.p0 Protein 4e-37 41
vicR YP_002123745.1 TCS response regulator VicR NC_010079.5776364.p0 Protein 4e-37 41
vicR YP_002123745.1 TCS response regulator VicR CP004022.1.gene3215. Protein 3e-35 41
vicR YP_002123745.1 TCS response regulator VicR CP001138.1.gene4273. Protein 1e-32 41
vicR YP_002123745.1 TCS response regulator VicR CP001918.1.gene5135. Protein 9e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_002123745.1 TCS response regulator VicR VFG1389 Protein 7e-35 43
vicR YP_002123745.1 TCS response regulator VicR VFG1563 Protein 3e-39 42
vicR YP_002123745.1 TCS response regulator VicR VFG1702 Protein 3e-39 41