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Name : fliP (HY04AAS1_0655) Accession : YP_002121320.1 Strain : Hydrogenobaculum sp. Y04AAS1 Genome accession: NC_011126 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : 3.1.1.3 Position : 588025 - 588783 bp Length : 759 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAGGCTAAAGACGTTAGTTAACATAGGCCTATTGCTTTTAATATTTATACATTTAGCAATGGCTCAAAACGAAAATCC TATCAATGTCATACCAGGCATACAGGTAAAGTTTAACAACGGTAACTTCACCGAAGCTATAAGGCTTATCCTGATATTAA CAGTACTGAGCTTAGCGCCATCCATAATAATAATGACGACATCTTTTATCAGAATAGTCACCGTTTTATCAGTGTTAAGA CAAGCTATTGGTCTCCCAAATGTCCCTCCAAACCAGGTGATAACGTCTTTAGCGCTTTTCCTTACGTTCTATGTCATGTA TCCTGTAATAAATCAAATAAATCAGAACGCTTTACAGCCATATCTTCAGCACAAAATTACAGATAAACAATTTATACAAA ATACGATAGAACCTATCAAAGATTTTATGGTAAGAAACACAAAAGTAAGCACCGAAAGAACGTTTTTATTAGCTTCAAAC ATACCAAACAAAGATAATATAAAAAACATAAACGACCTACCTTTAAGCGTAGTAATTCCAGCTTTTATGGTTAGTGAGCT ATCAATAGCCTTTCAAATTATATTTTTGCTTTACTTACCGTTTCTAATAATAGATATGGTGGTATCCGCCATACTGCTTG CAATGGGCATCATCATGATACCGCCAACCGTCATATCCTTACCATTTAAGATTATGCTTTTTGTACTTGTAAACGGTTGG GAATTAGTTATCTTATCGTTGGTGAGGAGTTACCATTGA Protein sequence : MRLKTLVNIGLLLLIFIHLAMAQNENPINVIPGIQVKFNNGNFTEAIRLILILTVLSLAPSIIIMTTSFIRIVTVLSVLR QAIGLPNVPPNQVITSLALFLTFYVMYPVINQINQNALQPYLQHKITDKQFIQNTIEPIKDFMVRNTKVSTERTFLLASN IPNKDNIKNINDLPLSVVIPAFMVSELSIAFQIIFLLYLPFLIIDMVVSAILLAMGIIMIPPTVISLPFKIMLFVLVNGW ELVILSLVRSYH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-11 | 41 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 1e-11 | 41 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 8e-22 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 2e-13 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 2e-13 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 1e-22 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-22 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 1e-22 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 1e-22 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 1e-22 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 5e-22 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 1e-22 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 1e-22 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-22 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 1e-22 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 1e-22 | 41 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 3e-20 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_002121320.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 2e-37 | 46 |
| fliP | YP_002121320.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 2e-35 | 44 |
| fliP | YP_002121320.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 3e-34 | 43 |
| fliP | YP_002121320.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 6e-34 | 43 |
| fliP | YP_002121320.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 3e-22 | 42 |
| fliP | YP_002121320.1 | flagellar biosynthesis protein FliP | VFG0827 | Protein | 6e-23 | 41 |
