|
Name : HY04AAS1_0372 (HY04AAS1_0372) Accession : YP_002121040.1 Strain : Hydrogenobaculum sp. Y04AAS1 Genome accession: NC_011126 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 327655 - 328920 bp Length : 1266 bp Strand : + Note : KEGG: aae:aq_298 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGATTAGTATAGAGCTTATAAGAAAAAATCCAGAGTATGTAAAAGAAAACTTAGCCAAAAGAGATATGTTTTTGAAAGA CAGGATAGATGACATACTAAAACTAGACGAAGAAAGAAGGCATAAGATAAAAAGAATTGAGGATTTGAGGGCTCTCAGAA ACGCTAAAAGCAAGGAGATAGGTAGTTTAAAAAAACAAGGACTAAACACGGAATCCCTTGAAGAAGAGATAAGGTTAATT AAAGAAGAAATATCAAAGTTAGAGGAAGAGTTAGCCCGCATAGAAAAATATACAGAAGACCTTCTTCTTAGAGTACCAAA TTTATTACACGAAAGTGTTCCTTACGGTAAGGATGAAAACGATAACGTAGAGATTAAAAGATGGGGTGAAATACCAAAGT TTGATTTTGGAATAAAAGACCATGCTGATCTTGGTGTTTTGAGAGGTTTTATAGATTTTGACCAAGCTACCGCTATATCT GGTAGTAGGTTTAGCATATTGAAAGGTCCTTTGGCAAAGCTAGAAAGGGCTCTTATAAACTTTATGCTTGAGATAAATGC GAAGAATGGCTATCAGGAAATGATAGTGCCTCATCTTGTAAAACCTCAAACGTTAGTGGGCACTGGGCAGCTTCCAAAAT TTCAAGAAGAGCTTTACTATGTAAAAGATGATGATCTTTATCTTATACCTACTGCTGAAGTACCTCTTGTAAACGTATTT AAAGACACCATATTAAAAGAAGATGATTTGCCCATTAACCTTACAGCTTATACTCCTTGTTATAGGAGAGAGGCGGGTTC TCATGGAAAAGATGTGAAAGGGCTTATTAGACAACACCAGTTTGATAAAGTAGAGCTTGTAAAAATAGTTCATCCAGATA GTTCTTACGACGAGCTAGAAAGGCTTTTGTCAAATGCAGAGGAGATTTTACAACTTTTAGAACTTCCCTACAGAGTAGTG GCTCTTTGTTCTGGTGATATAGGTTTTTCAGCTTCTAAAACTTACGATATAGAGGTATGGATACCTTCTCAAAATAAGTA TAGAGAAATATCTTCTTGTTCTAACTGTGAAGATTTTCAAGCAAGGAGGGCAAACATGAGGTTTAAAGATAAAACTGGCA AAAATAGGTTTGTTCACACTCTAAACGGTTCTTCTTTGGCGGTAGGTAGGACGTTGGTGGCTATTATGGAAAATTATCAA ACGAAAGATCACAAAATTAGAATACCAAAGGTTTTAAAAGATTACATAAAGGGAGAGTGTATATGA Protein sequence : MISIELIRKNPEYVKENLAKRDMFLKDRIDDILKLDEERRHKIKRIEDLRALRNAKSKEIGSLKKQGLNTESLEEEIRLI KEEISKLEEELARIEKYTEDLLLRVPNLLHESVPYGKDENDNVEIKRWGEIPKFDFGIKDHADLGVLRGFIDFDQATAIS GSRFSILKGPLAKLERALINFMLEINAKNGYQEMIVPHLVKPQTLVGTGQLPKFQEELYYVKDDDLYLIPTAEVPLVNVF KDTILKEDDLPINLTAYTPCYRREAGSHGKDVKGLIRQHQFDKVELVKIVHPDSSYDELERLLSNAEEILQLLELPYRVV ALCSGDIGFSASKTYDIEVWIPSQNKYREISSCSNCEDFQARRANMRFKDKTGKNRFVHTLNGSSLAVGRTLVAIMENYQ TKDHKIRIPKVLKDYIKGECI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-89 | 49 |
