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Name : HY04AAS1_0246 (HY04AAS1_0246) Accession : YP_002120916.1 Strain : Hydrogenobaculum sp. Y04AAS1 Genome accession: NC_011126 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 219379 - 221061 bp Length : 1683 bp Strand : - Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: aae:aq_1971 type IV pilus assembly protein TapB DNA sequence : ATGCCGGATACAGAAAGGAATTTAAGGTTTTTAAGATTTTTGCGAAACGAAGGACTCATAGATGACAATACATTAAAAGA ATTAAAAGATCTAGATATAGACATAGTAAGCTATCTTGTAGAAACTAAAAAAATAACTGAGCAAGATCTTCTTAACGCAT ATTCAAAAATGTTTAAATTTGTAGATAGATACGGTAGCATAGTAAACATAGATAAAATAGATAAAAATCTTTTAAACTTA TTTCCTCAAGATTTTATAGTAAAAAATAAAATAATACCCATTTCTATGTCTGACAATAATATTATTGTAGCTACATATAT GCCGTACATAGATGAAAATCAAATAAAGTACATTACCAAAAAAACAAATGTAATAATCTGGTACGCGGCACCGTCACACA TAAAAAGTGTAATAGATAATATCTTTCATAGTTCTGGATCTATAGACTTAAGCACAGAAGAGGTATATATAGAAGTAAAC CAAGAATACGATATCAATATAGAAAAGTTGGTAGAACAATCAAGCGAAAGTGCAATCGTGAAATTGGCTGACTCCATACT TTATAGAGCTGTAAAAGATGGTGCTTCTGATATACATATAGAGCCTCAGGAAAAAGAAATTGTTCTAAGATTTAGAATAG ATGGAATGCTGAAAAAAATAGACACTTACCCAACAAATATAAAAGAACCACTAGTATCTAGGTTTAAAATATTGGCAAAC CTCGATATATCGGAAAGAAGAAAGCCTCAAGACGGGACAATAAAAGTAAGAATATCAAATAAAAAAGTTCAGCTTAGAAT ATCGACACTTCCTACAATATTCGGTGAAAAAATAGTAATGAGAGTGCAGTTTCCTGATGAGTTTTCAGCTTTAAAATTAG AAACGCTTGGATTTGAAGAAGATGAAGTGGAAAAACTAAAACAAACTTACAGCAAACCTTATGGGATAATACTAGTGGTA GGACCCACAGGTAGCGGGAAAACTACAACCCTTTATTCAATACTTCAAGACTTAAACAAAGAAGATGTAAATATAGTAAC TGCCGAAGACCCGGTAGAAATAAATATACCAGGGCTTAATCAAGTCCAAATAGATGAAAAAGTAGGAAGGACTTTCGAAT CGGTTTTAAGGTCATTTTTAAGGCAAGACCCAGATATTATGCTTGTAGGTGAAATAAGAGATGCTATAACGGCTGAAATA GCGATAAAATCATCTCTTACTGGGCACTTAGTCCTATCAACGCTACATGTAAACGATGCGCCAAGTACGGTAGCAAGGCT TATAGACATGGGGATAGAACCGTTTCTCATATCATCTTCACTTTTGGCAGTATCCGCTCAAAGGCTTGTTAGAAAGTTGT GTCCATATTGCAAAATACCATATGAACCCACAAAGGAAAAAAGAGAATATTACGGCATTACCACCAATACAATATATAAA GCAAGCAAGCAAGGCTGTGAACATTGCAACTATTTAGGTTATAAAGGAAGAACTGTAATAGCAGAACTCATGTTTGTAGA TAATGAAATAAGAGAGGCTATAAATCAAAAGAAAACCACAGAAGAGATAAGAGAAATAGCTATTAAAAAAGGTATGAAGA CATTGTTTCAGTCTGGTATAATAAAAGTAAACAAAGGAATTACATCTTTAGAAGAAGTGTTAAGAGTATCTATACAAGAT TAA Protein sequence : MPDTERNLRFLRFLRNEGLIDDNTLKELKDLDIDIVSYLVETKKITEQDLLNAYSKMFKFVDRYGSIVNIDKIDKNLLNL FPQDFIVKNKIIPISMSDNNIIVATYMPYIDENQIKYITKKTNVIIWYAAPSHIKSVIDNIFHSSGSIDLSTEEVYIEVN QEYDINIEKLVEQSSESAIVKLADSILYRAVKDGASDIHIEPQEKEIVLRFRIDGMLKKIDTYPTNIKEPLVSRFKILAN LDISERRKPQDGTIKVRISNKKVQLRISTLPTIFGEKIVMRVQFPDEFSALKLETLGFEEDEVEKLKQTYSKPYGIILVV GPTGSGKTTTLYSILQDLNKEDVNIVTAEDPVEINIPGLNQVQIDEKVGRTFESVLRSFLRQDPDIMLVGEIRDAITAEI AIKSSLTGHLVLSTLHVNDAPSTVARLIDMGIEPFLISSSLLAVSAQRLVRKLCPYCKIPYEPTKEKREYYGITTNTIYK ASKQGCEHCNYLGYKGRTVIAELMFVDNEIREAINQKKTTEEIREIAIKKGMKTLFQSGIIKVNKGITSLEEVLRVSIQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-87 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-87 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HY04AAS1_0246 | YP_002120916.1 | type II secretion system protein E | VFG0182 | Protein | 2e-85 | 47 |
| HY04AAS1_0246 | YP_002120916.1 | type II secretion system protein E | VFG2048 | Protein | 7e-88 | 45 |
| HY04AAS1_0246 | YP_002120916.1 | type II secretion system protein E | VFG1876 | Protein | 2e-83 | 43 |
