Gene Information

Name : HY04AAS1_1550 (HY04AAS1_1550)
Accession : YP_002122210.1
Strain : Hydrogenobaculum sp. Y04AAS1
Genome accession: NC_011126
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 1466547 - 1467275 bp
Length : 729 bp
Strand : -
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cac:CAC2328 polysaccharide ABC transporter, ATPase component

DNA sequence :
ATGAGTGTTGTGATAGAGGTAAAAAATGTTACAAAGATCTTTAAAAGACATACGAAAAAATATTTTTCCATAAAGTCTGC
TTTTGTGGATTTTATAAAACACGGTAGACCCCAAAAGCAGATAGTAAAAGCCCTTGATAATATAAGCTTTGATATGGTAT
CTGGAAGCACTTTGGGTATAATAGGAAAAAACGGTGCTGGTAAATCTACCCTTCTTAAAATAATATCTGGCATCATAAAA
CCCACCTCTGGAAGCGTAAAGGTAAAAGGAAGCTTAGTGCCTCTTTTGGAGCTTGGCACTGGTTTTCATCCGGAGCTCAC
CGGTAGAGAAAACATCATCATAAGCGGTCTTATCCTTGGGCTTTCCAAAAAAGAAATATACAAGAAAATAGATGAGATAA
TAGAGTTTGCAGAGTTAAAAGATGTGATAGATGAACCTGTAAGGACTTACTCTTCTGGTATGTATTCAAGGCTTGCTTTT
TCTACGGCTTTTAGTATAGACCCAGATATTATAATCTTGGATGAGATACTATCGGTAGGTGATATATCTTTTATGAAAAA
AAGCAAAGAAAAGGTAAAAGAGTTTAAAAGAAAAAACAAAACGATATTGTTTGTAAGCCATGATATGACAAGTGTAAAAG
AGATGTGCGATGAAGCTATTTATATAGACAAAGGTAGGTTGATCCAAAGAGGGGAGGTAGATACTGTAGTGAGTTTATGC
GGTGTATAA

Protein sequence :
MSVVIEVKNVTKIFKRHTKKYFSIKSAFVDFIKHGRPQKQIVKALDNISFDMVSGSTLGIIGKNGAGKSTLLKIISGIIK
PTSGSVKVKGSLVPLLELGTGFHPELTGRENIIISGLILGLSKKEIYKKIDEIIEFAELKDVIDEPVRTYSSGMYSRLAF
STAFSIDPDIIILDEILSVGDISFMKKSKEKVKEFKRKNKTILFVSHDMTSVKEMCDEAIYIDKGRLIQRGEVDTVVSLC
GV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 7e-13 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HY04AAS1_1550 YP_002122210.1 ABC transporter VFG1449 Protein 3e-13 42