Gene Information

Name : HY04AAS1_1489 (HY04AAS1_1489)
Accession : YP_002122151.1
Strain : Hydrogenobaculum sp. Y04AAS1
Genome accession: NC_011126
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1404522 - 1406963 bp
Length : 2442 bp
Strand : -
Note : PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: aae:aq_1296 ATP-dependent Clp protease

DNA sequence :
ATGTTTGAGAAATTTACTGAAAGGGCTAGACAGATTATATTACAAGCAAGAGAAGAAGCTTTAGAGTTTGGTCATGGTTA
CCTTGGTACAGAGCACTTACTTTTGGCTCTTTTAAAAGAAGACGATATACCAACACTCGTGTTAGCTAAGTTTAACATTA
CACCTGAGAAGGTAAAAAAAGCCATTACAAGCCAAATGTCAAGGGGAAACCACACAGGAGAAGTATTGTTTGCTCCAGAT
GCCAAAAGGGTATTAGAGTTTGCCGTTGAGGAAGCAAGGATATTACATCATCAATTTGTTGGTACAGAACACATATTCAT
AGGTGTTGTAAGAGAAAAAACAGGTCTTGGTGGCAGAGTATTAAGAGGTTTGGGCCTTGATGAATACGCCGTAAGAAGAG
AAACGCTTCAAATACTAGGAGAACTACCAACTCAAGAAACCACAAAATATGTGGCGACACCTACATTAGATAGACACAGC
AGAGACATAACGTCTCTTGCTGCAGAAGGTAAGTTAGATCCAGTGGTGGGAAGAGAAAAAGAAATAGAGAGAACTATTCA
GATATTGGCAAGAAGAAGAAAAAACAACCCTGTTTTGATAGGAGATCCTGGAGTAGGAAAAACCGCTATAGTAGAGGGCT
TAGCACAGAGAATAGTAGCCAAGAGCGTACCAGAATCTTTGATAAACAAAAGAGTGGTAGTGCTTGATATAGCGTCTATA
GTAGCTGGTACAAAGTATAGAGGTCAGTTTGAAGAAAAGCTAAAAACTATTATAAAAGAGTTAGAAAAAGCGGTTAATGT
AATTCTATTCATAGACGAGCTTCATATGATTATAGGAGCTGGAGCAGCAGAGGGTTCTGTGGATGCCTCTAACATGCTAA
AACCAGCTTTAGCAAGAGGTGAGATTCAAATAATAGGAGCTACTACGCTTGATGAATATAGAAAATACATAGAAAAAGAC
GGCGCTTTAGAAAGAAGATTTCAACCAGTGTTGGTAGAACCACCTTCTGTAGAAGAAAGTATCGAGATTTTAAAAGGATT
AGCTCCAAGGTTTGAAAGCTTTCACAACGTTAAATACGAAGAAGAAGCTCTGAAGAAGGCAGTGGAGCTCTCTAACAAAT
ACATAAACGACAGATACCTACCAGATAAAGCTATAGATGTAATGGATGAGGCTGGAGCTTTGGTAAAAATAAGAGGCTCC
GAAATGCCAGAAGACCTTCAAAAAATGCTGGAGCAAATAAAAGAAATAGAACAAGCTAAAGATCAAGCTGCCGCTGAACA
AGATTATGAAAAAGCTGCAAACCTAAGAGACGAAGAGATGAGATTAAGAGCTAAGTTTGAAACTGCAAGACTAAAATGGA
AACAAGAACAAACCATAAATAGATCTTTAGTGACCGTAAAAGATGTTGCCTCTGTAGTAGCAAAATGGACTGGAGTACCG
GTAGATAAACTCTATGAAGATGACCTATCAAAACTAATGCACATAGAAGAAAAACTAAAAGAGAGAGTAATAGGTCAAGA
AGAAGCTATAAAAGCTGTAGCAAAAGCTATAAGGCGCTCACATGTAGGTTTAAAAGGTAAACACAAACCAATAGGGGTAT
TTATGTTCTTAGGTCCTACTGGTGTAGGTAAAACTGAAACTGCAAAAGCTTTGGCAGAATATCTTTTTGATACAGAAGAT
GCTCTCATAAGGTTTGATATGTCTGAATATATGGAGAAACACACGGTATCAAAGCTAATAGGTTCACCTCCTGGATACGT
AGGCTATGGAGAAGGTGGCCAACTTACTGAAAAAGTAAGAAGAAGACCGTACTCTGTAATACTCTTTGACGAGATAGAAA
AAGCTCATCCAGATGTATTCAATATATTCTTACAAATATTCGATGACGGAAGATTAACAGATGGCAGTGGAAGAGTGGTA
GATTTCTCCAACACCATAATCATAATGACTTCGAACCTCGGAGCAAAATCTATAATGCAGAACACAACCTTGGGATTTGA
AAGCAAACAAAACGAACTTGATAAAAAGAGTATGAAGAAAAACATAATAGAACAGGTGAAAAAACACTTCAACCCAGAAT
TTATCAACAGGTTAGATGAAATGATAGTGTTCGAACCTTTAGACGAAAAAGACTTAGAAAAGATATTGTATCTCCAAACC
AAAGAGATAAACAAAAACCTACAAGATATAGGTCTTAGTGTAGAAATTACAAAAGGGTTTGCAGATTGGATAATCTCCAA
AGAGTATAAGAAAGAATACGGGGCTAGAAGCTTAAGGAGAGCTATACAAAGACACATAGAAGATATGTTAGCAGAAAAGC
TCATAAACAAAGAACTAAAAGATGTGGTAAAAGTAGTAATAGATGTGAAAAACGATACACCTTACATAAAGAGCAAGAAA
AAGAATACCAGAGACAAGAAAGAGGTTGTAACCACCAAATGA

Protein sequence :
MFEKFTERARQIILQAREEALEFGHGYLGTEHLLLALLKEDDIPTLVLAKFNITPEKVKKAITSQMSRGNHTGEVLFAPD
AKRVLEFAVEEARILHHQFVGTEHIFIGVVREKTGLGGRVLRGLGLDEYAVRRETLQILGELPTQETTKYVATPTLDRHS
RDITSLAAEGKLDPVVGREKEIERTIQILARRRKNNPVLIGDPGVGKTAIVEGLAQRIVAKSVPESLINKRVVVLDIASI
VAGTKYRGQFEEKLKTIIKELEKAVNVILFIDELHMIIGAGAAEGSVDASNMLKPALARGEIQIIGATTLDEYRKYIEKD
GALERRFQPVLVEPPSVEESIEILKGLAPRFESFHNVKYEEEALKKAVELSNKYINDRYLPDKAIDVMDEAGALVKIRGS
EMPEDLQKMLEQIKEIEQAKDQAAAEQDYEKAANLRDEEMRLRAKFETARLKWKQEQTINRSLVTVKDVASVVAKWTGVP
VDKLYEDDLSKLMHIEEKLKERVIGQEEAIKAVAKAIRRSHVGLKGKHKPIGVFMFLGPTGVGKTETAKALAEYLFDTED
ALIRFDMSEYMEKHTVSKLIGSPPGYVGYGEGGQLTEKVRRRPYSVILFDEIEKAHPDVFNIFLQIFDDGRLTDGSGRVV
DFSNTIIIMTSNLGAKSIMQNTTLGFESKQNELDKKSMKKNIIEQVKKHFNPEFINRLDEMIVFEPLDEKDLEKILYLQT
KEINKNLQDIGLSVEITKGFADWIISKEYKKEYGARSLRRAIQRHIEDMLAEKLINKELKDVVKVVIDVKNDTPYIKSKK
KNTRDKKEVVTTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-178 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HY04AAS1_1489 YP_002122151.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 54
HY04AAS1_1489 YP_002122151.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 4e-154 54