|
Name : kdpB (SeSA_A0863) Accession : YP_002113813.1 Strain : Salmonella enterica CVM19633 Genome accession: NC_011094 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 836087 - 838135 bp Length : 2049 bp Strand : - Note : 'One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions' DNA sequence : ATGAGTCGCAAGCAACTGGCGCTGTTTGAACCTGTTTTACTCGTACAGGCGCTAACGGATGCCGTAAAAAAATTAAGCCC ACGCGCCCAGTGGCGTAACCCGGTGATGTTTGTGGTCTGGGCCGGCAGCGTGCTAACCACTCTGTTAACGCTCGCTATGG TAACAGGACAAATAACGGGAAGCGCCTTGTTTACAGGGGTGATCAGCCTGTGGTTATGGTTCACCGTACTGTTCGCCAAT TTTGCCGAAGCGCTCGCGGAAGGCCGCAGCAAAGCCCAGGCAAACAGTCTGAAAGGGGTGAAAAAGACCGCGTTCGCTCG CCGCCTGCGCGCCCCGCGCCATGATGCGCAGGCCGATAACGTGCCCGCCGCTGAACTGCGGAAAGGCGACATTGTCCTGG TCAAAGCGGGCGATATTATTCCCTGCGATGGCGAGGTCATCGAAGGCGGCGCCTCGGTGGATGAAAGTGCGATTACCGGC GAATCCGCGCCCGTGATCCGTGAGTCCGGCGGCGATTTCGCTTCTGTCACCGGCGGCACGCGAATTCTTTCCGACTGGCT GGTGATTGCCTGTAGCGTCAATCCTGGCGAAACCTTTCTTGACCGGATGATCGCGATGGTGGAAGGCGCGCAGCGGCGAA AAACGCCTAACGAGATTGCCCTGACGATTTTGCTCATTGCCCTGACCATTGTCTTTTTACTGGCGACCGCCACTCTGTGG CCCTTCTCCGCCTGGGGCGGTAATGCGGTCAGCGTCACCGTGTTGGTGGCGTTGCTGGTGTGCCTGATCCCCACTACCAT CGGCGGGCTACTCTCCGCCATTGGCGTAGCCGGAATGAGCCGAATGTTGGGCGCGAACGTCATCGCCACCAGCGGCCGCG CCGTAGAAGCCGCGGGCGATGTCGACGTGTTACTGCTGGATAAAACCGGCACTATCACGCTCGGCAATCGCCAGGCGTCC GATTTTATTCCCGCCCGAGGGGTGGACGAACGCACGCTGGCTGACGCCGCGCAGCTCGCTTCGCTGGCCGACGAAACGCC GGAAGGCCGCAGCATTGTGATCCTCGCCAAACAGCGCTTTAACCTGCGTGAACGCGATGTGCAGTCGCTTCATGCCACCT TTGTTCCGTTTACCGCGCAAAGCCGCATGAGCGGGATTAATATCGATAACCGGATGATCCGTAAAGGCTCGGTGGACGCG ATTCGGCGTCATGTCGAGAGCAATGGCGGCCATTTTCCCGCCGATGTCGAGCAAAACGTCGAGAACGTGGCGCGTCTGGG CGCGACGCCGCTGGTGGTCGTGGAAGGCGCGCGCGTACTGGGTGTTATCGCCCTCAAGGATATCGTTAAAGGCGGCATTA AAGAACGTTTCGCCCAGCTACGAAAGATGGGCATTAAAACGGTGATGATCACTGGCGATAACCGCCTGACGGCGGCAGCG ATTGCCGCCGAAGCCGGTGTGGACGATTTTCTTGCCGAAGCCACGCCGGAAGCCAAGCTGGCGCTGATCCGTCAATATCA GGCGGAAGGACGGCTGGTCGCCATGACCGGCGACGGCACTAACGATGCCCCGGCGCTGGCGCAGGCTGACGTCGCGGTGG CGATGAACTCCGGCACCCAGGCGGCAAAAGAAGCCGGTAATATGGTGGATCTGGACTCTAACCCGACCAAGTTGATTGAA GTGGTGCATATCGGTAAGCAGATGCTGATGACGCGCGGCTCGCTCACCACCTTCAGTATCGCGAATGATGTAGCGAAATA TTTCGCCATTATTCCCGCCGCGTTTGCCGCTACCTATCCGCAGCTAAACGCGCTCAACGTGATGGGGCTGCATTCGCCGA ACTCCGCCATTCTGAGCGCGGTGATCTTTAACGCCCTGATTATTATTTTTCTGATCCCGCTGGCATTAAAAGGCGTGAGT TATAAGCCGCTTTCCGCATCGGCCATGCTGCGCCGTAATTTATGGATCTATGGTCTGGGTGGTCTGGTGGTGCCGTTTAT TGGTATCAAAGTGATTGATGTGCTGCTGACCCTGCTGGGTCTGGCGTGA Protein sequence : MSRKQLALFEPVLLVQALTDAVKKLSPRAQWRNPVMFVVWAGSVLTTLLTLAMVTGQITGSALFTGVISLWLWFTVLFAN FAEALAEGRSKAQANSLKGVKKTAFARRLRAPRHDAQADNVPAAELRKGDIVLVKAGDIIPCDGEVIEGGASVDESAITG ESAPVIRESGGDFASVTGGTRILSDWLVIACSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTIVFLLATATLW PFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQAS DFIPARGVDERTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDA IRRHVESNGGHFPADVEQNVENVARLGATPLVVVEGARVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAA IAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIE VVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNVMGLHSPNSAILSAVIFNALIIIFLIPLALKGVS YKPLSASAMLRRNLWIYGLGGLVVPFIGIKVIDVLLTLLGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 9e-160 | 63 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 7e-160 | 63 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-132 | 57 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-132 | 57 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 4e-133 | 57 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-132 | 57 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-132 | 57 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-132 | 57 |
