Gene Information

Name : SeSA_A0762 (SeSA_A0762)
Accession : YP_002113722.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : IbrB protein
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 739377 - 739994 bp
Length : 618 bp
Strand : -
Note : identified by match to protein family HMM PF02195

DNA sequence :
ATGCAACACCGACTCACAACCGAAATAACTCACTTTCTCTCTGAACTGCCTGAAGAAGAGAGAATCGCCGCCATTAATGA
ATTTAGAATGGCGATACATAACGTTAGTCCTTTTCGCGATGAGCCTGTCGATTGTGTCCTGTGGGTGAAAAACGATCATA
TTTCGCCTAATGACTACAACCCGAATAACGTTGCGCCGCCGGAGAAAAAACTGCTGCTTAAATCGATTGAACAAGATGGG
TTTACTCAGCCGATAGTGGTGGTAAAGGCCGATGCGGAGGAGTACGAGATTGTGGACGGTTTTCACCGTCATGAGCTGGG
CAAAGGAAAAACGGTCCTGAAAAGGCGTCTGAAAGGCTACCTGCCGATAACGTGTCTGGACAGAGAACGTCACGAACGCA
TGGCGGCAACCATTCGGCATAACCGCGCGCGCGGACGCCACCAGATCCACGCCATGTCAGAAATCGTGCGCGAACTTTCT
CTGCTAGGCTGGGACGAAAGCAAAATCGGCCAGGAGTTAGGTATGGACGCCGATGAAGTCCTGCGCCTGAAACAGATCAA
CGGCCTGCAGGAGCTTTTTGCAGACCGTCGATTCTCCAGAGCGTGGACGGTTAAATAA

Protein sequence :
MQHRLTTEITHFLSELPEEERIAAINEFRMAIHNVSPFRDEPVDCVLWVKNDHISPNDYNPNNVAPPEKKLLLKSIEQDG
FTQPIVVVKADAEEYEIVDGFHRHELGKGKTVLKRRLKGYLPITCLDRERHERMAATIRHNRARGRHQIHAMSEIVRELS
LLGWDESKIGQELGMDADEVLRLKQINGLQELFADRRFSRAWTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 2e-54 61
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 2e-54 61
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-54 60
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-54 60
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 1e-55 60
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 3e-55 57
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-42 57
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-42 57
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-42 57
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 4e-55 56
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 2e-30 52
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 4e-31 51
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 7e-31 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A0762 YP_002113722.1 IbrB protein VFG1505 Protein 6e-56 60