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Name : SeSA_A4746 (SeSA_A4746) Accession : YP_002117410.1 Strain : Salmonella enterica CVM19633 Genome accession: NC_011094 Putative virulence/resistance : Virulence Product : superfamily I DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1112 EC number : - Position : 4609593 - 4613108 bp Length : 3516 bp Strand : + Note : identified by match to protein family HMM PF00614 DNA sequence : ATGGATGACAATGCTTTAGGGTTTGCCTCATACTGGCGCAATTCGCTGGCAGATGCTGAGTCAGGAAAGGGCAGTTTTGA ACGCAAAGATGCCAAAAATTTCACTCACTGGCATGGGATAGCGGCGGGACGTCTTGACGAAACGATCGTCGGTAAATTTT TTGAGGGAGAAAAAGACGACGTCGAAACAGTCGATGTCATCTTGCGGCCAAAGGTTTATTTCCGGTTACTGCAGCGTGGA AAGGACCATTCCGCTGGTGCGCCTGATATTGTTACCCCGATAGTGACGCCAGCCCTGTTGAGCCGTGAAGGTTTTTTATA TCCGACGCCAGCGACCTCCATTCCCAGAGACCTGCTTGAACCTTTGCCAAAAGGGGCATTTTCAATTGGTGAGATTGGGC AGTATGATAAATATAAAACGACACATACCTCATTCTCTATCAACTTTGATGACAGCGTTGATAAGACCGCCGAAACAGAT GAAGAACGAGAAGCACGATATGCAGCCTGGCAGCAGGATTGGCGTCAATATCTGGATGATTCAGAGAGGCTACTGAAGAA TGTTGTCGGCGACTGGATTAAAAATCCCGAGCAATATGAACTCGCTGAGCACGGTTATATTGTTAAAACGGCGCAATCTG GCGGCGCCAGTTTCCATATCCTTTCGCTTTATGATCACCTGCTTATTTGCAAAAAGGATGTGCCGCTCTTCAATCGCTTC GCCTCGCGAGAGGTTCATGCTGCAGAGTCATTACTTCCTCCGGAAGCAAAATTCAGCGACAGACTTGGACACTCCGGGGA TAAGTTTCCGCTGGCAAAGGCTCAGCGCGATGCCTTAAGCCATTTTCTGGATGCGAGGCATGGCGATATCCTTGCCGTTA ATGGTCCACCAGGAACCGGGAAAACCACGCTGGTGCTTTCTATCATCGCCACGCAGTGGGCCCGAGCGGCTCTCGAAAAA GCGGAGCCTCCGGTTATTATCGCGACTTCAACGAATAACCAGGCTGTAACGAACATTATCGAGGCGTTCGGGAAAGATTT TTCCCAGGGCACTGGTGTAATGGCCGGACGATGGTTGCCAGAGCTGAAAAGCTTCGGCGCTTATTTTCCCTCAAGCACTC GTAAAGCCGAGGCCGCCAAAAAATATCAAACTGAAGATTTCTTCAACCAGGTTGAGTCAAAAGAGTATGTAGAGGATGCA CTGCTGTTTTATCTGGAGAAAGCTAAGGCAGCCTTTCCTGAAAAAGAGTGTTCATCCCCTGAAAAGGTTATTGAACTCCT GCATGGTCAGTTGGCAGCAAAATCCGAACAACTGGTAAGGCTGAACACAACATGGCAAACGTTAAGCCAGGTTCGGGCAG CGCGTGAGCTTATTGCTAACGACATTAAGCAATATCTCGATAATTTAAATAAATTACTTGTCGGGCAAGAACAAAATGTC ACTCTACTAAAAAGTGCTAAAGCGGAATGGAAAAAATATCGGGCCAGTGAATCACTGATCTATCCATTATTTTCATGGCT ACCAGCGGTTCGCAGTAAGCGGCAGTACCAAATACAACTGTTTCTCGAAGATAAATTAGGTGCGCTGATTGCGGGAAATC AGTGGTCTGATCCTGAAACCATCGAACGTAATATCGATAGGTTACTTAATTCCGCCGAGCGCGAGCAAACAACCTACCGG CAGCAGATTGACTCCGCGCATGAAATCGTTCTTAAAGAACAGCAGGCGGCTCAGGAATGGCAGAGGCTGGCACTTGATTT AGGGTATGAGGGGGGCGAGGAACTGAGCTTCTCACAGGCAGATGAGCTGGCTGATACGCAGATTCGCTTCCCTGCATTCT TACTGGCGACCCACTACTGGGAAGGTCGTTGGTTGATGGATATGGCCAGCATTGATGATCTGCAGAAAGAAAAGGGCAAG AAAGGTGCTAAAGGAGTAGCCGCTCGCTGGCAACGCCGAATGAAACTTACCCCATGCGTGGTCATGACCTGTTATATGCT GCCCGGCAATATGCAGATAAGTGAACACAAAGGACAACGTAAATTCGAGAAAAGTTATTTATATGATTTTGCCGATTTAC TCATTGTCGATGAAGCCGGGCAGGTGCTTCCTGAAGTGGCTGCTGCTTCGTTTGCTCTGGCTAAAAAGGCATTAGTGATT GGTGATACGGAACAGATCCCGCCAATATGGAGTATTACTCCTGCTATTGATATAGGTAACATGCTGGCGGAAAAAATTCT GTCAGGCAGTACGCAAGAAGAGATTACTGAGAAATATACGGCAATCGCAGAGCTTGGTAAAAGCGCCGCATCTGGCAGCG TCATGAAAATAGCGCAGTGTGCTTCACGCTATCAATATGATCCCGAACTGGCACGTGGCATGTACTTATATGAACACCGC CGGTGCTTCGATAATATTATTGGATACTGCAATACGCTTTGCTATCACGGTAAGTTGTTGCCTAAAAGAGGATGTGAAGA GAGCAATTTAATGCCCGCAATGGGTTATCTCCATATTGATGGTAAAGGAGAGCTGGCAAGTAGCGGAAGCCGATATAATT TGCTGGAGGCTGAAACGATAGCGGCCTGGCTGACAGATAACCAGCAAAGTATTGAAGCGTATTATGGTAAATCGCTTCAT GAAGTTGTCGGTATCGTGACGCCTTTTAGTGCGCAGGTATCGACCATCAAACAGGCGCTGGATAAACAAGGCATCAGCGC AGGCGCGAATGAAAAGTCGCTTACAGTAGGCACCGTGCATTCTCTTCAGGGCGCTGAAAGAGCGATTGTTATATTCTCGC CAGTCTATTCAAAGCATGAAGACGGCGCGTTTATTGATAGCGATAACAGCATGCTGAACGTTGCTGTCTCCCGAGCTAAG GACAGTTTCCTTGTCTTCGGCGATATGGACCTGTTTGAGATCCAGCCAGCCTCATCTCCGCGGGGATTACTGGCAAAATA TCTCTTTGAGTCAGAGAAAAATGCACTCTTTTTTGACTATAAAGAGCGTGAGGATTTAAAAACTTCCGAGACCAAAATCT ACACACTCCATGGTGTGGAGCAGCATGATAATTTCCTGAATCAGACGTTTGAAAATACCGGTAAACACATCACGATAGTC TCTCCATGGCTGACCTGGCAAAAGCTGGAGCAAACCGGTTTTCTTGATTCCATGATTGCGGCGTGTTCACGTGGTATTAA CGTCACGGTAGTCACTGACAGAAGCTACAACACTGAACATAATGATTTTGAGAAGCGAAAAGAGAAGCAGCAGAACCTCA AAGCGGCGCTGGAGAAACTGAACGCCCTTGGTATTGCGACAAAACTGGTCAATCGTGTTCATAGCAAAATTGTTATTGGT GATGATGGTTTGCTGTGCGTGGGATCGTTCAACTGGTTTAGCGCGACACGTGAAGCGCGATATGAACGATACGATACATC GATGGTTTATTGCGGTGATAACCTGAAGGGCGAGATTGAGGCAATTTACAATAGCCTTGAGAGGCGTCAGGTTTAG Protein sequence : MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDDVETVDVILRPKVYFRLLQRG KDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEPLPKGAFSIGEIGQYDKYKTTHTSFSINFDDSVDKTAETD EEREARYAAWQQDWRQYLDDSERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLICKKDVPLFNRF ASREVHAAESLLPPEAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTGKTTLVLSIIATQWARAALEK AEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGVMAGRWLPELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDA LLFYLEKAKAAFPEKECSSPEKVIELLHGQLAAKSEQLVRLNTTWQTLSQVRAARELIANDIKQYLDNLNKLLVGQEQNV TLLKSAKAEWKKYRASESLIYPLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPETIERNIDRLLNSAEREQTTYR QQIDSAHEIVLKEQQAAQEWQRLALDLGYEGGEELSFSQADELADTQIRFPAFLLATHYWEGRWLMDMASIDDLQKEKGK KGAKGVAARWQRRMKLTPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQCASRYQYDPELARGMYLYEHR RCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHIDGKGELASSGSRYNLLEAETIAAWLTDNQQSIEAYYGKSLH EVVGIVTPFSAQVSTIKQALDKQGISAGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALFFDYKEREDLKTSETKIYTLHGVEQHDNFLNQTFENTGKHITIV SPWLTWQKLEQTGFLDSMIAACSRGINVTVVTDRSYNTEHNDFEKRKEKQQNLKAALEKLNALGIATKLVNRVHSKIVIG DDGLLCVGSFNWFSATREARYERYDTSMVYCGDNLKGEIEAIYNSLERRQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3532 | YP_854230.1 | superfamily I DNA helicase | Not tested | PAI I APEC-O1 | Protein | 0.0 | 96 |
| ORF_2 | AAZ04413.1 | superfamily I DNA helicase | Not tested | PAI I APEC-O1 | Protein | 0.0 | 96 |
| S3169 | NP_838460.1 | superfamily I DNA helicase | Not tested | SHI-1 | Protein | 0.0 | 95 |
| SF2965 | NP_708739.1 | superfamily I DNA helicase | Not tested | SHI-1 | Protein | 0.0 | 95 |
| unnamed | CAD42018.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 0.0 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeSA_A4746 | YP_002117410.1 | superfamily I DNA helicase | VFG1537 | Protein | 0.0 | 95 |
| SeSA_A4746 | YP_002117410.1 | superfamily I DNA helicase | VFG0627 | Protein | 0.0 | 95 |
