|
Name : SeSA_A4577 (SeSA_A4577) Accession : YP_002117254.1 Strain : Salmonella enterica CVM19633 Genome accession: NC_011094 Putative virulence/resistance : Virulence Product : PefB Function : - COG functional category : - COG ID : - EC number : - Position : 4454804 - 4455094 bp Length : 291 bp Strand : + Note : identified by match to protein family HMM PF03333 DNA sequence : TTGAAACTGAATAAAAAATCATTTTCCGGCGTCAGGATAGTGAGGGCCGGGGAACTCGAACCGGGGGCAGTGTCCGAAGA GCAGTTCTGGCTACTTGTTGATATATCCCCGATACACAGTGAAAAGATTATTCTGGCCCTGAAAGATTATTTCGTTTCCG GGTATTCCAGAAAGGTTGTGTGCGAACGCCACGGTATGAGTGGCGGGTATCTCAGCACCAGTGTTAACCGGCTGAATTTT ATCAGCAGGAATGTGCATAAACTGGCGGGTTATTACAGCCATCATGAATGA Protein sequence : MKLNKKSFSGVRIVRAGELEPGAVSEEQFWLLVDISPIHSEKIILALKDYFVSGYSRKVVCERHGMSGGYLSTSVNRLNF ISRNVHKLAGYYSHHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sfaB | CAC43422.1 | SfaB protein | Virulence | PAI III 536 | Protein | 3e-18 | 52 |
| prfB | CAD42032.1 | PrfB protein | Virulence | PAI II 536 | Protein | 1e-17 | 47 |
| APECO1_3518 | YP_854257.1 | PapB-like protein | Virulence | PAI I APEC-O1 | Protein | 2e-16 | 47 |
| papB | YP_002414018.1 | pap operon regulatory protein PapB | Not tested | Not named | Protein | 2e-16 | 47 |
| papB | AAC61719.1 | PapB | Virulence | PAI I CFT073 | Protein | 1e-16 | 47 |
| papB | AAL67418.1 | PapB | Virulence | PAI II CFT073 | Protein | 1e-16 | 47 |
| papB | AAZ04473.1 | P pilus protein | Virulence | PAI I APEC-O1 | Protein | 1e-16 | 47 |
| pixB | CAE85162.1 | PixB protein | Not tested | PAI V 536 | Protein | 6e-12 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeSA_A4577 | YP_002117254.1 | PefB | VFG0436 | Protein | 4e-18 | 58 |
| SeSA_A4577 | YP_002117254.1 | PefB | VFG1641 | Protein | 1e-18 | 52 |
| SeSA_A4577 | YP_002117254.1 | PefB | VFG0942 | Protein | 7e-17 | 50 |
| SeSA_A4577 | YP_002117254.1 | PefB | VFG1551 | Protein | 6e-18 | 47 |
