Gene Information

Name : SeSA_A4004 (SeSA_A4004)
Accession : YP_002116737.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Unknown
Product : deoxyribose operon repressor
Function : -
COG functional category : K : Transcription
COG ID : COG1349
EC number : -
Position : 3876627 - 3877412 bp
Length : 786 bp
Strand : +
Note : identified by match to protein family HMM PF00455; match to protein family HMM PF08220

DNA sequence :
ATGGAGACCAAGCAAAAAGAACGTATCCGACGCTTGATGGAGTTACTGAAAAAGACCGATCGAATCCATCTGAAAGACGC
CGCGCGGATGCTGGAAGTTTCGGTGATGACCATTCGCCGCGATCTCAGCCAGGATGATGACCCTTTACCGCTGACGCTGC
TCGGCGGCTATATCGTCATGGTAAATAAGCCTACGTCTTCAACCAATATGCCGCTGCCGGCGAAAAAGACGCATCATCGG
GACGACCTTCCCGTTGCGATCCTGGCCGCCGGCCTGGTGCGTGAAAACGATCTGGTTTTTTTTGATAACGGTCCGGAAAT
GCCATTAGTTATCAGCATGATACCGGATGATATTACCTTTACCGGGATTTGCTACTCGCATCGGGTATTTATCGCGCTGA
ATGAAAAGCCTAATGCCACGGCGATTCTGTGCGGCGGCACCTATCGGGCCAAGAGCGATGCCTTTTATGATGCCAATAAT
CCTTCGGCGCTGGATTCGCTCAATCCGCGCAAAGTGTTTATTTCCGCCAGCGGCGTACATGAACATTTTGGCGTGAGCTG
GTTTAACCCGGATGATCTTGCCGCCAAACGTAAAGCGATGGAGCGCGGTCTGCGCAAAATTTTGCTGGCGCGTCACGCCC
TGTTTGATGAGGTCGCGCCTGCCAGCATTGGTCCGCTTTCTGCCTTTGATGTCCTGATTAGCGATCGCCCATTACCGACA
GATTATGCCGTTCACTGTCGAAATGGTTCCGTCAAAGTCATCACGCCTGATTCGGAAAGTGAATAA

Protein sequence :
METKQKERIRRLMELLKKTDRIHLKDAARMLEVSVMTIRRDLSQDDDPLPLTLLGGYIVMVNKPTSSTNMPLPAKKTHHR
DDLPVAILAAGLVRENDLVFFDNGPEMPLVISMIPDDITFTGICYSHRVFIALNEKPNATAILCGGTYRAKSDAFYDANN
PSALDSLNPRKVFISASGVHEHFGVSWFNPDDLAAKRKAMERGLRKILLARHALFDEVAPASIGPLSAFDVLISDRPLPT
DYAVHCRNGSVKVITPDSESE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85174.1 hypothetical protein Not tested PAI V 536 Protein 9e-99 83
deoQ ADD91721.1 putative transcriptional regulator DeoQ Not tested PAI-I AL862 Protein 1e-98 82