|
Name : rbsK (SeSA_A4003) Accession : YP_002116736.1 Strain : Salmonella enterica CVM19633 Genome accession: NC_011094 Putative virulence/resistance : Unknown Product : ribokinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0524 EC number : 2.7.1.15 Position : 3875382 - 3876302 bp Length : 921 bp Strand : - Note : identified by match to protein family HMM PF00294; match to protein family HMM TIGR02152 DNA sequence : ATGGATATCGCGGTTATTGGCTCTAACATGGTGGACCTTATCACCTACACCAACCAGATGCCCAAAGAAGGGGAAACTCT GGAAGCGCCGGCGTTTAAAATCGGCTGCGGCGGAAAAGGGGCGAACCAGGCCGTGGCGGCCGCTAAGCTCAATTCAAAAG TATTGATGTTGACCAAAGTGGGCGACGATATTTTTGCCGACAACACCATTCGTAATCTCGAATCCTGGGGGATCAATACG ACGTATGTAGAAAAAGTACCGTGTACCAGCAGCGGCGTAGCGCCGATTTTCGTCAACGCCAACTCCAGCAACAGCATCCT GATCATCAAAGGCGCTAACAAGTTTCTCTCGCCGGAAGATATCGATCGCGCAGCGGAAGATTTAAAAAAATGCCAGCTTA TTGTTCTGCAACTGGAAGTTCAGCTGGAAACGGTTTATCACGCAATAGAATTTGGCAAGAAACACGGGATTGAAGTGTTA TTAAACCCTGCGCCAGCATTACGGGAATTAGATATGTCTTATGCCTGTAAATGCGATTTCTTTGTACCCAATGAAACCGA GCTGGAAATATTAACCGGTATGCCAGTGGATACCTATGACCATATTCGCGCAGCGGCACGTTCGCTGGTGGATAAAGGGC TGAACAATATTATCGTCACCATGGGTGAGAAAGGCGCGCTGTGGATGACGCGTGACCAGGAAGTCCATGTTCCGGCGTTT CGAGTGAACGCTGTCGATACCAGCGGCGCGGGCGATGCCTTTATCGGCTGTTTCGCGCATTACTACGTCCAGAGCGGGGA TGTGGAAGCCGCCATGAAAAAAGCCGTCCTCTTTGCCGCTTTCAGCGTCACCGGGAAAGGCACCCAATCCTCTTATCCAA GCATTGAGCAATTTAATGAGTATCTTTCGTTGAACGAATAA Protein sequence : MDIAVIGSNMVDLITYTNQMPKEGETLEAPAFKIGCGGKGANQAVAAAKLNSKVLMLTKVGDDIFADNTIRNLESWGINT TYVEKVPCTSSGVAPIFVNANSSNSILIIKGANKFLSPEDIDRAAEDLKKCQLIVLQLEVQLETVYHAIEFGKKHGIEVL LNPAPALRELDMSYACKCDFFVPNETELEILTGMPVDTYDHIRAAARSLVDKGLNNIIVTMGEKGALWMTRDQEVHVPAF RVNAVDTSGAGDAFIGCFAHYYVQSGDVEAAMKKAVLFAAFSVTGKGTQSSYPSIEQFNEYLSLNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoK | ADD91722.1 | deoxyribokinase DeoK | Not tested | PAI-I AL862 | Protein | 2e-124 | 97 |
| unnamed | CAE85173.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 3e-124 | 97 |
| ORF4 | AAK27331.1 | unknown | Not tested | PAI-I AL862 | Protein | 5e-115 | 93 |
