Gene Information

Name : SeSA_A3964 (SeSA_A3964)
Accession : YP_002116698.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein C
Function : -
COG functional category : K : Transcription
COG ID : COG3710
EC number : -
Position : 3838761 - 3839525 bp
Length : 765 bp
Strand : -
Note : identified by match to protein family HMM PF00486

DNA sequence : 
ATGTTATGGATAATTAACGATAATATTGAATTTAATCCAGAAATGAATCGCCTGGCGTCATTATCGAGGCCAGATCTCAA
CATTATTCTGACAACGCCCGCCAGCCGTTGCTTGCGCCTTCTGCTGGAAAACGCCCCCTCTGTCGTCTCACAACAAACAT
TCTTTCAAAAAGTGTGGGAAGAAGACGGCATGGTGGTGTCGGCAAATACGCTTTATCAGAATATCTCCATTATTCGCCGC
GGATTACGTACCGTTGGCGAAAATGAAGATACGCTGATAATCACGGTTCCGCGTAGAGGCTTTCAGATTGAGCCTGGCGC
GAGCATCATGACCATCCGCAAAGACTTCGCTCAGACAATAGAAAAAAAGGGTGAGACGCCGCCGCGTATGTCAGGGCGTT
GGTTTAAACATTATGTACCTGTACTTTGGATGACCGGGACATTTGCTGTCGGTATTTTGCTTGGCACTATAAGCTGGCAA
ACCGTTCCCGATAAGGATTTTTATGATCGCTACACGCTGGTTGAAACAACGCAGGGTTGTCATTTTTTCTCGCGGAATGA
AGATATCGAAAGCGGTAGCCGCTTTGCAGGCTATAAGTCAATGATTCTAAAAACCGGTATGGATTGTCAGAAATACCCAT
GGGTCTATTTTCCTTCCAGCAGTCGCACCCCAGCGGTTACGGCATTGATTTGTCAGCAACCGTATAAAACGCGCGGCGAT
ACAGGCTGCGTGACGCTTTTTTTCCGCGGGGTGACACATGGGTAA

Protein sequence : 
MLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVVSQQTFFQKVWEEDGMVVSANTLYQNISIIRR
GLRTVGENEDTLIITVPRRGFQIEPGASIMTIRKDFAQTIEKKGETPPRMSGRWFKHYVPVLWMTGTFAVGILLGTISWQ
TVPDKDFYDRYTLVETTQGCHFFSRNEDIESGSRFAGYKSMILKTGMDCQKYPWVYFPSSSRTPAVTALICQQPYKTRGD
TGCVTLFFRGVTHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
marT NP_462658.3 transcriptional regulator Not tested SPI-3 Protein 5e-118 99
marT AAD16956.1 putative transcriptional regulator MarT Virulence SPI-3 Protein 1e-117 99
marT YP_218667.1 transcriptional regulatory protein Not tested SPI-3 Protein 9e-118 99
ECs3704 NP_311731.1 sensory transducer Not tested LIM Protein 1e-53 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A3964 YP_002116698.1 transcriptional regulatory protein C VFG0570 Protein 2e-118 99