Gene Information

Name : aldB (SeSA_A3879)
Accession : YP_002116615.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.-
Position : 3746323 - 3747861 bp
Length : 1539 bp
Strand : -
Note : identified by match to protein family HMM PF00171

DNA sequence :
ATGACGAACAATCCCCCTTCAACACGTATTCAGCCAGGTGAATACGGGTACCCACTGAAATTAAAAGCCCGCTATGACAA
TTTTATTGGCGGTGACTGGGTTGCGCCCGCCGACGGCGAATATTATCAAAACCTGACGCCAGTGACCGGCCAGCCGCTAT
GTGAAGTCGCTTCCTCCGGTAAAAAAGATGTCGATTTAGCGCTCGACGCCGCGCATAAGGCGAAAGATAAGTGGGCGCAT
ACGTCAGTACAAGACCGTGCCGCTATCTTGTTTAAGATCGCCGATCGGATGGAACAAAACCTCGAACTGTTGGCGACAGC
GGAAACCTGGGATAACGGTAAACCGATTCGTGAAACCAGCGCCGCCGACGTACCGCTGGCGATCGATCATTTCCGCTATT
TCGCCTCCTGTATACGTGCGCAGGAGGGCGGGATCAGCGAAGTTGATAGCGAAACCGTGGCCTACCATTTTCACGAACCG
CTTGGCGTCGTGGGGCAGATAATCCCGTGGAACTTTCCGTTGTTGATGGCAAGCTGGAAAATGGCGCCAGCGCTGGCGGC
GGGTAACTGCGTAGTGCTTAAACCGGCACGCCTGACGCCGCTTTCCGTTCTGCTGTTGATGGAAGTCATTGGCGATCTGT
TACCGCCGGGCGTCGTCAACGTCGTGAACGGCGCGGGCGGCGAGATCGGTGAATATCTGGCGACCTCGAAACGTATCGCG
AAGGTGGCGTTTACCGGTTCGACGGAAGTGGGTCAACAGATCATGCAGTACGCTACGCAGAATATTATTCCGGTGACGCT
GGAGTTAGGCGGTAAATCGCCAAATATCTTCTTTGCTGACGTGATGGATGAAGAAGATGCGTTCTTTGATAAAGCGCTGG
AGGGTTTTGCCCTGTTTGCCTTTAACCAGGGCGAGGTGTGTACCTGTCCAAGCCGTGCGCTGGTCCAGGAGTCCATCTAT
GAGCGCTTTATGGAGCGCGCTATTCGCCGGGTAGAGAGCATTCGCAGTGGGAACCCGCTAGATAGCGGTACGCAAATGGG
GGCGCAGGTCTCCCACGGCCAGCTTGAGACTATCCTCAATTATATCGATATCGGTAAAAAAGAGGGGGCCGATATTCTGA
CCGGTGGGCGACGCAAGGAGCTGGATGGCGAACTTAAAGAGGGCTATTACCTTGAGCCCACTATCCTGTTTGGTAAGAAT
AATATGCGCGTCTTTCAGGAGGAGATCTTTGGCCCGGTGCTGGCGGTAACCACCTTTAAAACCATGGAGGAGGCGCTGGA
AATCGCTAACGATACGCAGTATGGCCTCGGCGCAGGCGTCTGGAGCCGCAACGGCAATCTGGCTTATAAGATGGGTCGCG
GCATTCAGGCCGGGCGCGTATGGACCAACTGCTATCACGCCTATCCGGCACACGCGGCGTTTGGCGGCTATAAGCAGTCG
GGCATCGGGCGCGAAACGCATAAGATGATGCTGGAACACTACCAGCAAACCAAGTGTCTGCTGGTGAGCTATTCCGATAA
GCCGCTGGGGCTGTTCTGA

Protein sequence :
MTNNPPSTRIQPGEYGYPLKLKARYDNFIGGDWVAPADGEYYQNLTPVTGQPLCEVASSGKKDVDLALDAAHKAKDKWAH
TSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEVIGDLLPPGVVNVVNGAGGEIGEYLATSKRIA
KVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIY
ERFMERAIRRVESIRSGNPLDSGTQMGAQVSHGQLETILNYIDIGKKEGADILTGGRRKELDGELKEGYYLEPTILFGKN
NMRVFQEEIFGPVLAVTTFKTMEEALEIANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQS
GIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-140 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-145 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-145 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-145 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-145 63
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-54 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldB YP_002116615.1 aldehyde dehydrogenase VFG0082 Protein 2e-140 64