|
Name : SeSA_A3702 (SeSA_A3702) Accession : YP_002116446.1 Strain : Salmonella enterica CVM19633 Genome accession: NC_011094 Putative virulence/resistance : Unknown Product : transcriptional accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 3558134 - 3560464 bp Length : 2331 bp Strand : + Note : identified by match to protein family HMM PF00575; match to protein family HMM PF09371 DNA sequence : ATGATGAATGATTCTTTCTGCCGCATTATTGCGGGTGAAATCCAGGCAAATGCCGGGCAGGTTGAAGCTGCCGTTCGCCT GCTTGACGAAGGGAACACCGTGCCGTTTATCGCACGTTATCGTAAAGAAATCACCGGCGGTCTGGATGACACGCAGTTGC GTAACCTGGAAACGCGTCTGGGCTATCTGCGTGAGCTGGAAGACAGGCGTCAGGCCATCCTCAAGTCCATTTCCGAACAA GGCAAACTGACCGATGAGCTGGCTGGCGCCATCAACGCTACGTTAAGTAAGACCGAGCTCGAAGACCTCTACCTGCCCTA TAAACCTAAACGCCGCACCCGTGGACAAATCGCCATTGAAGCCGGCCTTGAGCCGCTGGCCGATCTGCTCTGGAACGAAC CGTCCCACGATCCTGACGTGGAAGCGGCAAAGTACATTGATGGCGACAAAGGCGTGGCGGACACGAAAGCCGCGCTCGAC GGCGCACGCTACATTCTGATGGAGCGCTTTGCCGAAGACGCCGCATTGCTGGCGAAAGTGCGTGATTACCTGTGGAAGAA CGCCCATCTGGTCGCCACGGTCGTGAGCGGCAAAGAGGAAGAAGGGGCAAAATTCCGCGACTATTTCGACCATCATGAGC CCATTGCTAACGTCCCGTCTCACCGTGCGCTGGCCATGTTCCGTGGTCGTAACGAAGGCATTCTGCAACTTTCGCTCAAT GCCGACCCACAGTTTGATGAGCCGCCGAAAGAAAGCTACTGCGAGCAAATCATCATGGACCATCTCGGCCTGCGGCTAAA TAACGCCCCGGCGGATAGCTGGCGCAAAGGCGTAGTGAGCTGGACGTGGCGTATCAAAGTCTTAATGCACCTCGAAACCG AACTGATGGGCACCGTGCGCGAACGTGCAGAAGATGAAGCGATTAACGTGTTTGCCCGTAACCTGCACGACCTGCTGATG GCAGCCCCCGCAGGCCTGCGCGCCACGATGGGCCTTGATCCTGGCCTGCGTACCGGCGTAAAAGTCGCTGTCGTTGACGG CACCGGCAAGCTGGTGGCGACGGATACCATTTATCCGCATACCGGTCAGGCGGCCAAAGCGGCTACCGTGATCGCCGCGC TGTGCGAAAAATACCACGTCGAACTGGTCGCGATTGGCAACGGTACGGCCTCGCGTGAAACCGAACGCTTCTATCTCGAC GTACAGAAACAGTTCCCGAACGTGACGGCGCAGAAAGTGATCGTCAGCGAAGCGGGGGCGTCCGTGTATTCCGCTTCTGA GCTGGCGGCGCAGGAGTTTCCGGATCTCGACGTCTCCCTGCGCGGCGCGGTCTCTATCGCGCGTCGCCTGCAGGATCCGC TGGCGGAACTGGTGAAAATCGATCCGAAATCCATCGGCGTCGGCCAATATCAACACGATGTCAGCCAGACCCAGTTGGCG CGTAAGCTGGATGCGGTGGTCGAAGACTGCGTAAACGCCGTCGGCGTCGATTTGAATACCGCCTCCGTGCCGCTGCTGAC CCGCGTCGCGGGCTTAACGCGCATGATGGCGCAAAACATCGTCGCCTGGCGCGATGAGAACGGTCAGTTTCAGAACCGCC AGCAACTGTTGAAGGTGAGCCGTCTGGGGCCGAAAGCGTTTGAGCAGTGCGCGGGCTTCCTGCGTATTAACCACGGCGAT AACCCGCTGGATGCCTCCACCGTCCACCCGGAAGCCTATCCGGTTGTCGAACGCATTCTGGCGGCGACGCAGCAAGCGCT AAAAGATCTGATGGGCAACAGCAACGAATTGCGTCACCTCAAGGCCGCTGATTTTACCGACGATAAATTCGGCGTGCCGA CCGTGAGCGATATCATCAAAGAGCTGGAAAAACCGGGCCGCGACCCACGTCCTGAATTTAAAACCGCGCAATTCGCCGAT GGCGTCGAAACCATGAACGACCTGCTGCCGGGGATGATTCTGGAAGGGGCGGTCACTAACGTCACTAACTTCGGCGCGTT TGTCGATATCGGCGTTCATCAGGATGGCCTGGTGCATATCTCCTCGCTCTCGAATAAGTTCGTTGAAGATCCGCACACCG TGGTGAAAGCGGGCGACATCGTGAAGGTGAAAGTGCTGGAAGTGGATCTGCAACGTAAGCGTATCGCCCTGACCATGCGT CTGGACGAGCAGCCCGGCGAAACCGCCGCTCGCCGCGGCGGCGGCGCCGATCGCGCTCAGGGCAACCGCCCGGCATCTAA AGCGGCGAAACCGCGCGGTCGTGACGCCCAGCCAGCCGGTAACAGCGCCATGATGGACGCGCTGGCAGCCGCAATGGGAA AAAAACGCTAA Protein sequence : MMNDSFCRIIAGEIQANAGQVEAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLGYLRELEDRRQAILKSISEQ GKLTDELAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWNEPSHDPDVEAAKYIDGDKGVADTKAALD GARYILMERFAEDAALLAKVRDYLWKNAHLVATVVSGKEEEGAKFRDYFDHHEPIANVPSHRALAMFRGRNEGILQLSLN ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLM AAPAGLRATMGLDPGLRTGVKVAVVDGTGKLVATDTIYPHTGQAAKAATVIAALCEKYHVELVAIGNGTASRETERFYLD VQKQFPNVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD NPLDASTVHPEAYPVVERILAATQQALKDLMGNSNELRHLKAADFTDDKFGVPTVSDIIKELEKPGRDPRPEFKTAQFAD GVETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR LDEQPGETAARRGGGADRAQGNRPASKAAKPRGRDAQPAGNSAMMDALAAAMGKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 60 |
