Gene Information

Name : SeSA_A0337 (SeSA_A0337)
Accession : YP_002113316.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : pilus assembly chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 343747 - 344484 bp
Length : 738 bp
Strand : +
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
ATGAAAACAATTAATTTTGTTTTAATGGCGGCAGCTTTGTTCGCCTCTAATTCTATGGTTTCAGTATATGCCGCCAGGCA
GCAATTAAATTCAGCCACTAAATCATTCAGCGTGAAGCTGGGAGCTACACGTGTGATTTATCACGCTGGTACACCAAGCG
CGACGCTCTCGGTGAGCAACCCGCAGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGAAGACAAAAATTCGCCA
GCCCCCTTTATGGTGATGCCGCCTCTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTATCCGTACTGGTGG
TGACATGCCAACGGATCGCGAGACTTTACAGTGGGTCTGTATAAAGGCGCTACCACCCGAAAATGAACAGTCGGATACAC
AGGCTAAGGGCGCGACCCTTGACCTCAATTTGTCCATCAGCACCTGTGACAAGCTGATTTTCCGCCCGGATGCCGTGAAG
GGGACGCCGGAAGATGTTGCAGGAAATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTAGAGAACCCCACCCCGTT
TTACATGAATTTAGCCTCTGTCACAGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATATCCCCCCCTTTGCTGACAAAA
CACTAAATATGCCAGGTGGCACTCGTGGTGATGTCGAGTGGAAAATTATTACAGACTTAGGTGGTGAAAGTCATCCGTTC
CACTACGTTTTTAAATAA

Protein sequence : 
MKTINFVLMAAALFASNSMVSVYAARQQLNSATKSFSVKLGATRVIYHAGTPSATLSVSNPQNYPILVQSSVKAEDKNSP
APFMVMPPLFRLEANQQSQLRIIRTGGDMPTDRETLQWVCIKALPPENEQSDTQAKGATLDLNLSISTCDKLIFRPDAVK
GTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGGTRGDVEWKIITDLGGESHPF
HYVFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 4e-101 87
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 2e-54 46
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 2e-54 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A0337 YP_002113316.1 pilus assembly chaperone VFG0943 Protein 1e-53 51
SeSA_A0337 YP_002113316.1 pilus assembly chaperone VFG0858 Protein 4e-52 50
SeSA_A0337 YP_002113316.1 pilus assembly chaperone VFG0850 Protein 6e-55 49
SeSA_A0337 YP_002113316.1 pilus assembly chaperone VFG0852 Protein 5e-53 48