Gene Information

Name : SeSA_A3295 (SeSA_A3295)
Accession : YP_002116068.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Unknown
Product : HpcH/HpaI aldolase/citrate lyase family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2301
EC number : -
Position : 3178720 - 3179562 bp
Length : 843 bp
Strand : -
Note : identified by match to protein family HMM PF03328

DNA sequence :
ATGCCCGATATTTCTCATACACCGACACGTAGCTGGCTTTTTACCCCAGCAATTCGACCAGAACGTTTCATAAAAGCAGT
TGAAAGTGCGGCGGACATTTCTATTATCGATCTTGAAGATTCCGTCACCCCGAATGACAAGGCGCAGGCCCGGAAAATTG
CGATGCAGTTCCTTTCATCCCGACCAAACTCATCGCTGAAAATAGCATTAAGAATTAATGGAATGAATACTCATGCTGGC
ATTGAAGACCTGCATATGTTACTGGAATGCCGTTTTTTTCCTGATTACATTATTCTTCCAAAAACAGAGTCAGCCGCGCA
CCTGCAAATCGTGGATAGTCTTATCATGATGGCTGGTTCTGATACTCGCCTTATTGGCATTATTGAGTCAGTTGTCGGGC
TTAATGCCGTTGAGTCTATTGCGGACGCCACCCCCAGACTCTGCGGGTTGATGTTTGGCGCCGCAGATATGGCGGCTGAC
ATTGGCGCCACACCCGCCTGGGAGCCTCTTGCGCTGGCGCGGGCCAGAATAGTGGCTGCCTGCGCTATGAAAGGGCTTCT
TGCAATAGATGCTCCCTTCTTTGATATAGGCGATTTTTCAGGTCTGAAAGAGGAAACGCTGCAGGCGCTCAGTTTTGGTT
TTTCTGCAAAATCGGCTATTCACCCCGCTCAGATTAGTGTAATCAACACCGCATTTACTCCTACAACGGCAGAAATTAAT
CATGCTCGTGCAGTACTGACAGAGAATGCCAAAGGCGTCGGGATCGTTAGCGGCATGATGATAGATGCAGCCGTTGCCCG
TCAGGCCCGGAGATTACTCGCCCGGGCAGGGATCTTTTCCTGA

Protein sequence :
MPDISHTPTRSWLFTPAIRPERFIKAVESAADISIIDLEDSVTPNDKAQARKIAMQFLSSRPNSSLKIALRINGMNTHAG
IEDLHMLLECRFFPDYIILPKTESAAHLQIVDSLIMMAGSDTRLIGIIESVVGLNAVESIADATPRLCGLMFGAADMAAD
IGATPAWEPLALARARIVAACAMKGLLAIDAPFFDIGDFSGLKEETLQALSFGFSAKSAIHPAQISVINTAFTPTTAEIN
HARAVLTENAKGVGIVSGMMIDAAVARQARRLLARAGIFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
citE AAK97548.1 CitE Not tested SPI-6 Protein 7e-113 99