Gene Information

Name : SeSA_A3052 (SeSA_A3052)
Accession : YP_002115851.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : invasion protein
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 2950478 - 2951227 bp
Length : 750 bp
Strand : -
Note : identified by match to protein family HMM PF00165

DNA sequence :
ATGCTAAATACGCAGGAAGTACTTAAAGAAGGAGAGAAGCGGAAAATCCGCAGCCCGGAAGCATGGTTTATACAGACGTG
TTCCGCGCAAAAGCTGCATATGTCATTTTCTGAAAGCCGACGCAATGAAAACTGCCTGATTCAGGAAGGCGCGCTGCTTT
TTTGCGAGCAGGCCGTTGTCGCACCAGTATCAGGAGACCTGGTTTTTCGACCGTTAAAAATTGAAGTACTCAGCAAATTA
CTGGCATTTATCGATGGCGCAGGATTAGTGGACACGACATATGCTGAATCCGATAAATGGGTTTTGCTGAGTCCTGAGTT
TCGCGCTATTTGGCAAGATCGTAAACGCTGCGAGTACTGGTTTTTGCAGCAAATTATTACGCCTTCTCCGGCCTTCAATA
AGGTACTGGCGCTGTTACGAAAAAGCGAGAGTTACTGGTTGGTTGGCTATTTACTCGCTCAGTCAACCAGCGGCAACACG
ATGAGAATGCTGGGAGAAGACTATGGCGTTTCTTATACCCATTTTCGTCGTTTGTGCAGCAGAGCGTTGGGCGGAAAAGC
GAAGAGTGAATTACGAAACTGGCGTATGGCGCAATCGCTGCTGAATAGTGTAGAAGGCCACGAGAACATCACCCAATTAG
CCGTTAATCATGGTTACTCATCGCCTTCACATTTTTCTAGTGAGATCAAAGAGCTGATCGGCGTTTCGCCTCGGAAATTA
TCAAATATTATTCAATTGGCAGACAAATGA

Protein sequence :
MLNTQEVLKEGEKRKIRSPEAWFIQTCSAQKLHMSFSESRRNENCLIQEGALLFCEQAVVAPVSGDLVFRPLKIEVLSKL
LAFIDGAGLVDTTYAESDKWVLLSPEFRAIWQDRKRCEYWFLQQIITPSPAFNKVLALLRKSESYWLVGYLLAQSTSGNT
MRMLGEDYGVSYTHFRRLCSRALGGKAKSELRNWRMAQSLLNSVEGHENITQLAVNHGYSSPSHFSSEIKELIGVSPRKL
SNIIQLADK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invF NP_461820.1 invasion regulatory protein Virulence SPI-1 Protein 1e-97 99
invF NP_457293.1 possible AraC-family regulatory protein Virulence SPI-1 Protein 1e-97 99
invF NP_806502.1 AraC family transcriptional regulator Virulence SPI-1 Protein 1e-97 99
invF YP_217818.1 invasion protein Virulence SPI-1 Protein 9e-114 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A3052 YP_002115851.1 invasion protein VFG0560 Protein 5e-98 99