Gene Information

Name : epaR (SeSA_A3041)
Accession : YP_002115840.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : type III secretion apparatus protein SpaR/YscT/HrcT
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 2939786 - 2940577 bp
Length : 792 bp
Strand : -
Note : identified by match to protein family HMM PF01311; match to protein family HMM TIGR01401

DNA sequence :
ATGTTTTACGCGTTGTACTTTGAAATTCATCACCTGGTTGCGTCTGCGGCACTAGGGTTTGCTCGCGTGGCGCCGATTTT
TTTCTTCATGCCGTTTTTGAATAGCGGGGTATTAAGCGGCGCGCCGAGAAACGCCATTATCATCCTGGTGGCATTGGGAG
TATGGCCGCATGCATTGAACGAGGCGCCGCCGTTTTTATCGGTGGCGATGATCCCGTTAGTTCTGCAAGAAGCGGCGGTA
GGCGTCATGCTGGGCTGTCTGCTGTCATGGCCTTTTTGGGTTATGCATGCGCTGGGTTGTATTATCGATAACCAGCGAGG
GGCAACGCTAAGTAGCAGTATCGATCCGGCAAACGGTATTGATACCTCGGAAATGGCTAATTTCCTGAATATGTTTGCCG
CTGTCGTTTATTTACAAAACGGCGGTCTGGTCACGATGGTTGACGTGTTAAATAAAAGCTATCAGCTATGCGATCCGATG
AACGAGTGCACGCCTTCATTACCGCCGCTATTAACGTTTATTAATCAGGTGGCTCAAAACGCCTTGGTTCTGGCCAGTCC
GGTGGTATTAGTGCTGTTGCTGTCAGAAGTATTCCTGGGTTTATTGTCGCGCTTTGCTCCGCAAATGAACGCCTTTGCGA
TTTCACTGACGGTAAAAAGCGGCATTGCCGTTTTAATTATGCTGCTTTATTTCTCTCCGGTGCTACCGGACAATGTACTG
CGACTCTCTTTCCAGGCCACAGGATTAAGCAGTTGGTTTTACGAGCGAGGGGCGACGCATGTCCTCGAATAA

Protein sequence :
MFYALYFEIHHLVASAALGFARVAPIFFFMPFLNSGVLSGAPRNAIIILVALGVWPHALNEAPPFLSVAMIPLVLQEAAV
GVMLGCLLSWPFWVMHALGCIIDNQRGATLSSSIDPANGIDTSEMANFLNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPM
NECTPSLPPLLTFINQVAQNALVLASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTVKSGIAVLIMLLYFSPVLPDNVL
RLSFQATGLSSWFYERGATHVLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 2e-103 99
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 4e-104 99
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 4e-104 99
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 1e-105 99
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 1e-32 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epaR YP_002115840.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG0549 Protein 4e-106 99
epaR YP_002115840.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG1014 Protein 1e-35 51
epaR YP_002115840.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG2453 Protein 1e-31 44