|
Name : SeSA_A3036 (SeSA_A3036) Accession : YP_002115836.1 Strain : Salmonella enterica CVM19633 Genome accession: NC_011094 Putative virulence/resistance : Virulence Product : type III effector protein IpaD/SipD/SspD Function : - COG functional category : - COG ID : - EC number : - Position : 2933960 - 2934982 bp Length : 1023 bp Strand : - Note : identified by match to protein family HMM PF06511; match to protein family HMM TIGR02553 DNA sequence : ATGCTTAATATTCAAAATTATTCCGCTTCTCCTCATCCGGGGATCGTTGCCGAACGGCCGCAGACTCCCTCGGCGAGCGA GCACGTCGAGACTGCCGTGGTACCGTCTACCACAGAACATCGCGGCACAGATATCATTTCATTATCGCAGGCGGCTACTA AAATCCAGCAGGCACAGCAGACGCTGCAGTCAACGCCACCGATCTCTGAAGAGAATAATGACGAGCGCACGCTGGCGCGC CAACAGTTGACCAGCAGCCTGAATGCTCTGGCGAAGTCTGGCGTGTCATTATCCGCAGAACAAAATGAGAACCTGCGGAG CGCGTTTTCTGCGCCGACGTCGGCCTTATTTAGCGCTTCGCCTATGGCGCAACCGAGAACAACCATTTCTGATGCTGAGA TTTGGGATATGGTTTCCCAAAATATATCGGCGATAGGTGACAGCTATCTGGGCGTTTATGAAAACGTTGTCGCAGTCTAT ACCGATTTTTATCAGGCCTTCAGTGATATTCTTTCCAAAATGGGAGGCTGGTTATCGCCTGGTAAGGATGGAAATACCAT TAAGCTAAATGTTGACTCACTTAAAAGTGAAATAAGTAGTTTAATTAATAAATACACTCAAATAAATAAAAATACGATTT TATTTCCCTCGCAAACTGGCAGCGGAGTGACAACAGCAACGAAAGCGGAAGCTGAGCAGTGGATTAAAGAATTGAATTTA CCGGACAGCTGTCTAAAGGCGTCTGGTTCTGGTTATGTCGTACTGGTGGATACGGGGCCACTGAGCAAAATGGTTAGCGA TCTTAATGGAATAGGATCGGGTTCAGCCCTTGAACTGGATAACGCCAAATATCAAGCCTGGCAGTCGGGTTTTAAAGCAC AGGAAGAAAATCTGAAAACCACATTACAGACGCTGACGCAAAAATACAGCAATGCCAATTCATTGTACGACAACCTGGTA AAAGTGCTGAGCAGTACGATAAGTAGCAGCCTGGAAACCGCCAAAAGCTTCCTGCAAGGATAA Protein sequence : MLNIQNYSASPHPGIVAERPQTPSASEHVETAVVPSTTEHRGTDIISLSQAATKIQQAQQTLQSTPPISEENNDERTLAR QQLTSSLNALAKSGVSLSAEQNENLRSAFSAPTSALFSASPMAQPRTTISDAEIWDMVSQNISAIGDSYLGVYENVVAVY TDFYQAFSDILSKMGGWLSPGKDGNTIKLNVDSLKSEISSLINKYTQINKNTILFPSQTGSGVTTATKAEAEQWIKELNL PDSCLKASGSGYVVLVDTGPLSKMVSDLNGIGSGSALELDNAKYQAWQSGFKAQEENLKTTLQTLTQKYSNANSLYDNLV KVLSSTISSSLETAKSFLQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sipD | NP_806486.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 2e-136 | 99 |
| sipD | NP_457277.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 2e-136 | 99 |
| sipD | YP_217802.1 | cell invasion protein | Virulence | SPI-1 | Protein | 5e-123 | 89 |
| sipD | NP_461804.1 | translocation machinery component | Virulence | SPI-1 | Protein | 3e-124 | 89 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeSA_A3036 | YP_002115836.1 | type III effector protein IpaD/SipD/SspD | VFG0544 | Protein | 1e-124 | 89 |
