Gene Information

Name : SeSA_A3031 (SeSA_A3031)
Accession : YP_002115831.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : effector protein SptP
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2453
EC number : 3.1.3.48
Position : 2929276 - 2930883 bp
Length : 1608 bp
Strand : -
Note : identified by match to protein family HMM PF00102; match to protein family HMM PF03545; match to protein family HMM PF09119

DNA sequence :
TTGAATAATTTAACGTTGTCTTCGTTTTCAAAAGTTGGTGTGTCGAATGATGCCCGACTTTATATTGCTAAGGAAAATAC
TGATAAGGCATATGTTGCGCCTGAAAAATTTTCGTCAAAAGTATTAACCTGGCTTGGAAAAATGCCGTTATTTAAAAACA
CTGAAGTGGTGCAAAAACATACGGAAAACATCAAAGGACAGGATCAGAAAATTTTACAAACATTTCTCCAGGCACTAACG
GAAAAATATGGGGAAACAGCGGTCAATAACGCACTGTTAATGTCCCGTATAAATATGAACAAACCCCTTACCCAACGTTT
AGCAGTGCAGATCACGGAGTGTGTAAAAGCTGCTGACGAAGGGTTTATAAACCTTATTAAGAGCAAGGATAATGTTGGTG
TCATGAATGCCGCTTTAGTCATAAAAGGCGGCGATACAAAAGTGGCAGAAAAAAATAACGATGTTGGAGCAGAAAGTAAG
CAACCTTTACTCGATATCGCGCTAAAGGGACTTAAAAGAACATTACCGCAACTGGAACAAATGGATGGAAATAGCCTGCG
AGAAAACTTCCAGGAGATGGCTTCAGGTAACGGCCCGCTACGTTCATTAATGACGAATTTACAGAATTTAAATAAAATTC
CAGAGGCTAAACAACTTAATGATTATGTTACAACGTTAAAAAATATTCAGATAGGAGCAGACAGGTTCTCACAATGGGGA
ACCTGTGGGGGAGTGGTTGAGAGGTGGATTGATAAAGCCTCTACTCATGAATTAACCCAGGCTGTAAAAAAAATTCACGT
TATTGCTAAAGAACTGAAAAACGTTACAGCTGAACTTGAGAAAATAGAAGCCGGCGCGCCAATGCCACAGACGATGAGCG
GACCGACACTGGGCCTGGCACGGTTTGCGGTCAGCAGCATTCCAATTAATCAGCAAACCCAAGTGAAACTGAGCGATGGA
ATGCCTGTGCCAGTGAATACGTTAACTTTTGACGGTAAGCCTGTGGCATTAGCCGGTTCGTACCCAAAAAATACGCCGGA
TGCGCTGGAAGCGCATATGAAAATGCTTCTTGAAAAAGAATGCTCGTGCTTGGTGGTGTTAACGTCGGAAGATCAGATGC
AGGCAAAACAATTACCACCCTATTTCAGAGGGAGCTACACTTTTGGCGAGGTGCATACCAACAGCCAAAAAGTGAGCTCA
GCCAGTCAGGGAGGAGCGATAGACCAATACAATATGCACCTGTCCTGCGGGGAAAAGCAGTATACAATCCCGGTATTGCA
TGTGAAAAATTGGCCAGATCACCAGCCGTTACCGTCTACTGATCAGTTAGAATACCTGGCAGATAGGGTGAAAAATAGTA
ACCAAAATGGCGCGCCGGGGCGTAGTTCATCAGATAAGTATTTACCGATGATTCATTGTCTGGACGGAGTGGGGAGAACC
GGAACGATGGCGGCGGCTCTTGTACTTAAGGATAATCCTCATAGTAATCTGGAGCAGGTACGTGCAGATTTCCGGGATTC
ACGGAACAATAGAATGCTGGAAGACGCCTCACAGTTTGTACAACTAAAAGCAATGCAAGCCCAGTTGCTTATGACGACGG
CAAGCTGA

Protein sequence :
MNNLTLSSFSKVGVSNDARLYIAKENTDKAYVAPEKFSSKVLTWLGKMPLFKNTEVVQKHTENIKGQDQKILQTFLQALT
EKYGETAVNNALLMSRINMNKPLTQRLAVQITECVKAADEGFINLIKSKDNVGVMNAALVIKGGDTKVAEKNNDVGAESK
QPLLDIALKGLKRTLPQLEQMDGNSLRENFQEMASGNGPLRSLMTNLQNLNKIPEAKQLNDYVTTLKNIQIGADRFSQWG
TCGGVVERWIDKASTHELTQAVKKIHVIAKELKNVTAELEKIEAGAPMPQTMSGPTLGLARFAVSSIPINQQTQVKLSDG
MPVPVNTLTFDGKPVALAGSYPKNTPDALEAHMKMLLEKECSCLVVLTSEDQMQAKQLPPYFRGSYTFGEVHTNSQKVSS
ASQGGAIDQYNMHLSCGEKQYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKYLPMIHCLDGVGRT
GTMAAALVLKDNPHSNLEQVRADFRDSRNNRMLEDASQFVQLKAMQAQLLMTTAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sptP NP_461799.1 protein tyrosine phosphatase/GTPase activating protein Virulence SPI-1 Protein 0.0 97
sptP YP_217797.1 protein tyrosine phosphate Not tested SPI-1 Protein 0.0 97
stpA NP_806481.1 tyrosine phosphatase Virulence SPI-1 Protein 0.0 95
stpA NP_457272.1 tyrosine phosphatase (associated with virulence) Virulence SPI-1 Protein 0.0 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A3031 YP_002115831.1 effector protein SptP VFG0540 Protein 0.0 97