Gene Information

Name : SeSA_A3020 (SeSA_A3020)
Accession : YP_002115821.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : transcriptional regulator, AraC family protein
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 2919304 - 2920191 bp
Length : 888 bp
Strand : -
Note : identified by match to protein family HMM PF00165

DNA sequence :
ATGGTATTGCCTTCAATGAATAAATCAGTTGAGGCCATTAGCAATAATCACCTTCAACAGCCGAACAAATTTCCATTAAT
AAATGGATTAGCTGACGTAAGAGACTATTATGTCGCAAACTGCTTATTGTTTAAACTTAATAAAGGCAGTTTGCGAATTG
AAAACGAATTTGGGGAGTTCATCGAACAATCTGCGCCGTGTTTATTTTTATTGGAAAAAGATCAAACAATCACGCTTAGT
ATGAGCGAAATAGAAGGGCATATTGATTTTTCTTCACTGGAAGTTTCCTATGACTTAATGCAAAAATTCTACAAAGTTTT
TTACAGTACAAGAAACTATAATGATCGAGAGCTATCATTAAAAACGAAACCAAAGTATTTTTTTCATGCGGACTTGTTGC
CAGGGATGAGTGATACTTTTGACTCTATTTTGCATGGTGTGGCATGTCCACGGGTTTGTAGTAACGTGAGTATTGATGAT
CATGATTATTCATATTTCTCATTGATGTATCTTATATCAGCATTTGTACGTAAGCCCGGTGGGTTTGATTTCCTTGAGCG
AGCAATAAAAATTACGACAAAAGAGAAAGTTTATAACATTATTATCAGCGATCTCACCCGCAAATGGTCACAGGCTGAGG
TAGCAGGAAAGCTGTTTATGAGCGTATCAAGTCTGAAGCGAAAACTGGCCGCTGAAGAGGTGAGTTTTAGCAAAATATAT
CTGGATGCTCGTATGAATCAGGCTATAAAATTATTACGTATGGGGGCTGGAAATATTTCACAAGTCGCGACGATGTGTGG
CTATGATACGCCTTCTTATTTTATCGCTATTTTTAAACGGCATTTTAAGATTACACCGCTTAGCTTTATGCGTACGATGA
ACCATTGA

Protein sequence :
MVLPSMNKSVEAISNNHLQQPNKFPLINGLADVRDYYVANCLLFKLNKGSLRIENEFGEFIEQSAPCLFLLEKDQTITLS
MSEIEGHIDFSSLEVSYDLMQKFYKVFYSTRNYNDRELSLKTKPKYFFHADLLPGMSDTFDSILHGVACPRVCSNVSIDD
HDYSYFSLMYLISAFVRKPGGFDFLERAIKITTKEKVYNIIISDLTRKWSQAEVAGKLFMSVSSLKRKLAAEEVSFSKIY
LDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSFMRTMNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hilC YP_217786.1 AraC family transcriptional regulator Not tested SPI-1 Protein 5e-138 100
sprA NP_457261.1 possible AraC-family transcriptional regulator Virulence SPI-1 Protein 7e-137 99
sprA NP_806470.1 AraC family transcriptional regulator Virulence SPI-1 Protein 7e-137 99
hilC NP_461788.1 invasion regulatory protein Virulence SPI-1 Protein 1e-137 99
sprA AAD37784.1 transcriptional regulator SprA Virulence SPI-1 Protein 1e-137 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A3020 YP_002115821.1 transcriptional regulator, AraC family protein VFG0531 Protein 6e-138 99