Gene Information

Name : SeSA_A2107 (SeSA_A2107)
Accession : YP_002114984.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Resistance
Product : amino-acid ABC transporter ATP-binding protein YecC
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 2018462 - 2019214 bp
Length : 753 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGAGTGCGATCGAAGTCACCAACCTGGTCAAAAAATTTCATGGTCAAACGGTGCTGCACGGTATCGACCTTGAGGTGAA
GCCCGGAGAAGTCGTCGCCATTATCGGCCCGAGCGGCTCAGGGAAAACAACGTTATTACGCTGCATTAACCTGCTGGAAC
AACCGGAAGCGGGCACCATTAAAGTGGGCGATATTATCATCGATACCGCCCGCCCATTCAGCCAGCAAAAAGGGTTGATT
CGCCAGCTACGTCAGCATGTCGGCTTTGTCTTTCAGAGTTTTAACCTGTTCCCGCATCGTACCGTGCTGGAAAATATCAT
TGAAGGTCCGGTGATTGTAAAGGGAGAGCCGAAAGCCGAGGCGACGGCGCTGGCGCGGGAACTGTTAGCCAAAGTCGGGT
TGGCTGGTAAAGAGACCCGTTATCCGCGCCGCCTGTCGGGCGGGCAACAGCAGCGCGTGGCGATTGCGCGTGCGCTGGCG
ATGCGCCCGGAAGTGATTCTGTTTGATGAGCCCACGTCGGCGCTTGATCCTGAATTAGTCGGCGAGGTGCTTAATACAAT
TCGCCAGCTGGCGCAGGAAAAGCGCACGATGGTGATCGTCACTCACGAAATGGGCTTTGCGCGTGACGTGGCTGACCGGG
CAATATTTATGGATCAGGGGCAAATCGTTGAGCAGGGGCCGGCGAAAACCTTGTTCGCCGATCCTCAGCATCCGCGTACC
CGCCAGTTCCTTGAGAAATTTTTAGTGAAATAA

Protein sequence :
MSAIEVTNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIKVGDIIIDTARPFSQQKGLI
RQLRQHVGFVFQSFNLFPHRTVLENIIEGPVIVKGEPKAEATALARELLAKVGLAGKETRYPRRLSGGQQQRVAIARALA
MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMGFARDVADRAIFMDQGQIVEQGPAKTLFADPQHPRT
RQFLEKFLVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A2107 YP_002114984.1 amino-acid ABC transporter ATP-binding protein YecC NC_012469.1.7686878. Protein 6e-25 43