Gene Information

Name : SeSA_A1999 (SeSA_A1999)
Accession : YP_002114888.2
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : guanine nucleotide exchange factor SopE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1930024 - 1930746 bp
Length : 723 bp
Strand : -
Note : identified by match to protein family HMM PF07487

DNA sequence : 
GTGACTAACATAACACTATCCACCCAGCACTACAGAATCCATAGAAGTGACGTTGAACCAGTAAAAGAAAAAACAACGGA
GAAGGACATTTTTGCAAAAAGTATTACTGCCGTTAGAAATAGCTTTATCAGCCTGTCGACGAGTTTGTCAGATCGCTTTA
GCCTGCATCTGCAAACAGACATACCGACTACCCATTTTCATCGTGGGAGCGCCTCTGAGGGGAGGGCAGTATTAACCAGT
AAAACTGTTAAAGATTTTATGCTGCAAAAGCTCAATAGCCTGGATATCAAAGGTAATGCGAGTAAAGATCCGGCCTATGC
TCGTCAGACATGCGAAGCCATATTAGCAGCCGTGTACAGTAATAATAAAGATCAATGTTGTAAATTACTCATCAGTAAAG
GGATCAGTATTACCCCATTTCTGAAAGAGATAGGAGAGGCTGCGCAGAATGCGGGGCTACCTGGAGAGATGAAAAACGGC
GTATTTACTCCAGGTGGGGCAGGGGCGAATCCTTTTGTCGTCCCCCTCATTGCTGCAGCGAGCATTAAATATCCGCATAT
GTTTATAAATCATAATCAGCAGGTGTCTTTTAAAGCGCATGCTGAGAAAATCGTTATGAAAGAAGTTACGCCGCTGTTTA
ATAAGGGGACGATGCCAACGCCACAACAATTTCAGTTAACTATAGAAAATATTGCGAATAAGTATCTTCAGAATGCCTCC
TGA

Protein sequence : 
MTNITLSTQHYRIHRSDVEPVKEKTTEKDIFAKSITAVRNSFISLSTSLSDRFSLHLQTDIPTTHFHRGSASEGRAVLTS
KTVKDFMLQKLNSLDIKGNASKDPAYARQTCEAILAAVYSNNKDQCCKLLISKGISITPFLKEIGEAAQNAGLPGEMKNG
VFTPGGAGANPFVVPLIAAASIKYPHMFINHNQQVSFKAHAEKIVMKEVTPLFNKGTMPTPQQFQLTIENIANKYLQNAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopE NP_458691.1 invasion-associated secreted protein. Virulence SPI-7 Protein 1e-80 70
sopE NP_807899.1 invasion-associated secreted protein Virulence SPI-7 Protein 1e-80 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A1999 YP_002114888.2 guanine nucleotide exchange factor SopE VFG0467 Protein 4e-109 98