Gene Information

Name : SeSA_A0195 (SeSA_A0195)
Accession : YP_002113195.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : chaperone protein FimC
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 206546 - 207229 bp
Length : 684 bp
Strand : -
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence :
ATGAATTCATTGGCTAAAGCAGGGTTGCTTTGTTGCCTGTTGTGCGGTTCGCTGGCGCATGCCGCAGGGATAAACATCGG
CGCAACGCGGGTTATTTTTCACGGCGATGCCAAAGATGCATCCATATCGATAAGCAATAGCGACAACGTTCCCTATTTAA
TTCAGTCCTGGGCGCAATCGATCAGCGAAACCGGGGCGATCGGCGATGCGCCGTTTATGGTCACCCCGCCGCTTTTTCGC
CTTAATGGCGGGCAAAAGAACGTACTGCGAATTATCCGTACCGGCGGCAATTTGCCGGAAGATCGCGAGTCGCTGTACTG
GCTGGATATTAAATCGATTCCCAGCAGCAATCCGGACAATAAGCACAATACGCTCATGCTGGCCGTTAAAGCGGAATTTA
AGCTGATTTACCGGCCAAAAGCGTTAACCCAAAAGCCAGAAGAGGTTGCCGATCGGTTAACGTGGTCGCGTCAGGGTCGC
ACGCTCACCGTGAAGAACCCCACGCCCTATTATATGAACTTCGCCACCCTTTCCGTTGGCAGTCAAAAAATAAAAGCCCC
GCGCTATGTGGCGCCTTTCGGCAACGCGCAGTACACGCTGCCTGCCGCCGCCAGCGGCCCGATCGCCTGGTCTATCATCA
ACGATTTTGGCGGTACTGGCCCCGAACATAAACAAACGCCTTGA

Protein sequence :
MNSLAKAGLLCCLLCGSLAHAAGINIGATRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGAIGDAPFMVTPPLFR
LNGGQKNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGR
TLTVKNPTPYYMNFATLSVGSQKIKAPRYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGPEHKQTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 4e-41 43
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 5e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A0195 YP_002113195.1 chaperone protein FimC VFG0445 Protein 3e-33 41